| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1534 |
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| Symbol | |
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| ID | 5053686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1603307 |
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| End bp | 1603870 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471707 |
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| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
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| Protein accession | YP_001156312 |
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| Protein GI | 145589715 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0450] Peroxiredoxin |
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| TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000027691 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAATCA TTAATACTGC AGTTCAACCA TTCAAAACCG AAGCTTTCCA TAATGGCAAG
TTCGTAACCG TGACCGACGA GAGCATTAAA GGCAAATGGT CAGTTTTTAT TTTCATGCCA
GCAGCTTTTA CATTTAACTG CCCTACTGAA ATTGAAGATG CAGCAGAAAA CTATGCTGAA
TTCCAAAAAA TGGGCGCAGA AGTTTATATC ATCACTACCG ATACGCATTT CTCACACAAA
GTATGGCATG AGACATCACC TGCTGTTGGT AAAGCGAAGT TCCCACTCGT TGGCGATCCA
ACACATACAT TGACAAATGC TTTTGGCGTA CATATTCCTG AAGCAGGTCT GGCATTGCGT
GGCACTTTCA TCATCAATCC AGAAGGCATC ATCAAGACTG CAGAAATTCA TTCCAATGAA
ATCGCACGTG ATGTATCTGA AACATTGCGC AAGCTCAAAG CTGCTCAGTA CACAGCTGCT
CACCCAGGTG AAGTTTGCCC AGCGAAATGG AAAGAAGGCG CAGCTACATT GACTCCATCT
TTAGACCTCG TAGGCAAGAT CTAA
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| Protein sequence | MSIINTAVQP FKTEAFHNGK FVTVTDESIK GKWSVFIFMP AAFTFNCPTE IEDAAENYAE
FQKMGAEVYI ITTDTHFSHK VWHETSPAVG KAKFPLVGDP THTLTNAFGV HIPEAGLALR
GTFIINPEGI IKTAEIHSNE IARDVSETLR KLKAAQYTAA HPGEVCPAKW KEGAATLTPS
LDLVGKI
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