| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1506 |
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| Symbol | |
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| ID | 5052848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1580465 |
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| End bp | 1581763 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471679 |
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| Product | isocitrate lyase |
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| Protein accession | YP_001156284 |
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| Protein GI | 145589687 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATC GCAAAGCAGA AATCGCAGCG TTACAAAAAG ATTGGGACAC CAATCCACGC
TGGAAAGGTA TTACTCGTGG TTATACGGCT GAGGACGTTG TACGTCTTCG CGGCTCATTG
AAGATTGAGC ACACTTTAGC CAAGCATGGC GCAGAGCGTC TATGGGAATT GGTTAATAAC
GAAGCTTACG TTAACTGTTT AGGTGCTTTG ACTGGTGGTC AAGCAATGCA ACAAGTTAAA
GCTGGCGTAC AAGCAATTTA TTTATCTGGT TGGCAAGTGG CTGCTGACGG TAACTCATAC
GCAGCGATGT ATCCAGACCA ATCTTTATAT CCAGTAGATT CAGTTCCTAA AATGGTTGAG
CGTATTAATA ACTCATTCCA ACGTGCTGAC GAAATTCAAA CTGCAAAAGG TATTCAGCGT
GGCGATGCTG GCTTTATCGA ATATTTCGCG CCAATCGTTG CTGATGCTGA AGCAGGTTTC
GGTGGCGTAT TGAATGCATT TGAGTTAAGC AAGGCATTGA TCAAGCAAGG TGCTGCTGGC
GTTCACTTTG AAGACCAATT GTCTTCAGTG AAGAAGTGCG GTCACTTGGG TGGTAAGGTC
TTGTTGCCTA CATCTGAATC AGTTCAAAAA TTGATCTCTG CACGTTTGGC TGCAGACGTA
ATGGGTACTC CGACGATCAT CTTGGCCCGT ACCGATGCTG AAGCTGCCGA CTTGTTGACC
TCAGACTACG ATGAGAATGA CAAGCCATTC TTGACAGGCG AGCGTACTCC AGAAGGCTTC
TACAAAACAC GTAAGGGCTT AGATCAGGCG ATCTCCCGTG GTCTCGCATA CGCTGCTTAC
GCAGATATGG TTTGGTGTGA AACAGGTACT CCTGATCTGG ATTTTGCTCG TCAGTTTGCT
GAAGCAATTC GTGCGAAGTT CCCAGGAAAG ATGTTGGCAT ACAACTGCTC ACCTTCTTTC
AACTGGAAGA AAAACCTGGA TGACGCAACA ATTGCTAAAT TCCAACGTGA GTTGGGCGCG
ATGGGTTACA AGTATCAATT TATTACTCTC GCTGGTATCC ACTCTATGTG GTACAACATG
TTCGACTTGG CGCAAGACTA CATGCAACGC GGTATGACTG CCTACATCGA GAAAGTACAA
GAGCCAGAAT TTGCAGCACG TGATCGTGGA TACACCTTCG TTTCACATCA GCAAGAAGTT
GGTACTGGTT ATTTCGATGA TGTAACAACA GTTATTCAAG GTGGTAAGTC TTCCGTAACG
GCCTTAACTG GTTCTACTGA AGAAGAGCAG TTCCACTAA
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| Protein sequence | MADRKAEIAA LQKDWDTNPR WKGITRGYTA EDVVRLRGSL KIEHTLAKHG AERLWELVNN
EAYVNCLGAL TGGQAMQQVK AGVQAIYLSG WQVAADGNSY AAMYPDQSLY PVDSVPKMVE
RINNSFQRAD EIQTAKGIQR GDAGFIEYFA PIVADAEAGF GGVLNAFELS KALIKQGAAG
VHFEDQLSSV KKCGHLGGKV LLPTSESVQK LISARLAADV MGTPTIILAR TDAEAADLLT
SDYDENDKPF LTGERTPEGF YKTRKGLDQA ISRGLAYAAY ADMVWCETGT PDLDFARQFA
EAIRAKFPGK MLAYNCSPSF NWKKNLDDAT IAKFQRELGA MGYKYQFITL AGIHSMWYNM
FDLAQDYMQR GMTAYIEKVQ EPEFAARDRG YTFVSHQQEV GTGYFDDVTT VIQGGKSSVT
ALTGSTEEEQ FH
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