Gene Pnuc_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1476 
Symbol 
ID5053756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1553929 
End bp1554903 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content45% 
IMG OID640471649 
Productcysteine synthase A 
Protein accessionYP_001156254 
Protein GI145589657 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTACT TTACTGATAA CTCTCAAACT ATTGGACGCA CTCCTTTGGT ACGCTTAAAT 
CGCGTTACTG ATGGTGCGAA GGCGACTGTA CTTGCCAAAA TTGAGGGCCG TAATCCAGCA 
TTTTCCGTGA AATGCCGTAT TGGCGTAGCG ATGATTAATG ATGCACAAGA AAAAGGTCTC 
TTAGGCCCAG GCAAAGAACT GGTAGAGCCG ACTAGTGGCA ATACTGGTAT TGCCTTGGCC 
TTCGTTGCCG CTGCTCGTGG TATTCCATTG ACTTTGACTA TGCCTGAAAC GATGAGTATT 
GAGCGTCGCA AGTTATTAAC CGCGCTCGGT GCCAAGATTG TGTTGACTGA AGGGCCTAAG 
GGAATGAATG GCGCAATAGC TAAGGCGAAA GAGATTGCAG AATCAGATTC TAATAAATAT 
GTATTGCTAC AACAATTTAG TAATCCAGCG AACCCAGCCA TTCATGAGAA AACGACTGGT 
CCAGAAATTT GGGAAGACAC TGATGGCAAT ATTGATGTGT TTGTAGCTGG TGTGGGAACT 
GGCGGGACAA TTTCTGGAGT GGGTCGTTAT CTTAAAAATA CCAAGAAGAA AGCAGTTGAA 
ATTGTTGCTG TAGAGCCAAC TGGTAGCCCA GTGATTACTC AAAAGCTGAA CGGTGAAGAA 
ATTAAACCTG CCCCACATAA GATTCAAGGT ATTGGTGCTG GCTTTATTCC AGATAATTTG 
GATTTATCAA TAGTAGATAA GGTAGAGCAA GTGAGCAATG AGGAGGCGAT TGAGTTTGCG 
CGCCGCATTG CTAAAGAGGA AGGTATTTTG GTGGGGATTT CATGTGGTGC CGCAGCGGCA 
GTAGCGGTGC GCTTGGCCAA AAAGCCTGAG TACGCCGGCA AGACTATCGT AGTGGTGCTT 
CCAGATGCTG CTGAGCGTTA CTTAAGCTCA GCCTTGTTTG AAGGTGTGTT TGATGAAAAA 
GGTTTGCCGG TATAA
 
Protein sequence
MTYFTDNSQT IGRTPLVRLN RVTDGAKATV LAKIEGRNPA FSVKCRIGVA MINDAQEKGL 
LGPGKELVEP TSGNTGIALA FVAAARGIPL TLTMPETMSI ERRKLLTALG AKIVLTEGPK 
GMNGAIAKAK EIAESDSNKY VLLQQFSNPA NPAIHEKTTG PEIWEDTDGN IDVFVAGVGT 
GGTISGVGRY LKNTKKKAVE IVAVEPTGSP VITQKLNGEE IKPAPHKIQG IGAGFIPDNL 
DLSIVDKVEQ VSNEEAIEFA RRIAKEEGIL VGISCGAAAA VAVRLAKKPE YAGKTIVVVL 
PDAAERYLSS ALFEGVFDEK GLPV