| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1470 |
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| Symbol | |
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| ID | 5053343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1547316 |
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| End bp | 1549076 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640471643 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001156248 |
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| Protein GI | 145589651 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGT TTTCTCATCG CCCCTTTTCT GAGCGCACAG CCACATGGCT ACAGCAAAGC
GGCTTACATC CTCTGCTTGC AAGACTCTAC GCAGCACGCG GCCTAGAGTC TCCAGAAGAT
CTCTCTTTGG AGTTGAGAAA TTTAATCTCC CCTAAAGAGC TAAAAAACTG CTTGAGCACT
GCTTCTTTAC TGGCGGATAT TCTCGAGAAA AAAGAACCGA TGCTAATCGT CGCAGACTAT
GACTGTGACG GCGCTACCGC TTGCGCTGTA GGTCTGCGAG GGTTGCGGAT GTTAGGTGGT
CCAGACACAC CCATTCAATT TTTAGTTCCC AATCGCTTCA CCATGGGCTA CGGATTAACT
CCAGAAGTAG TTGAGTTAGC AGCGCAGCAA ATCCCTAAGC CGAAATATCT CATTACTGTC
GATAACGGTA TTGCCAGTGA AGCAGGTGTC GATAGAGCTC GCGAACTTGG CATGGAGGTC
ATTGTTACCG ATCACCATTT ACCTGGTGAT CGTCTTCCAA AAGCAACGGC TATCGTCAAC
CCTAATCAAC CAGGTTGTAG CTTTCCCAGT AAAGCGCTCG CTGGCGTCGG CGTGATGTTT
TATTTATTAG TGGCGCTCAG AGCAGAATTA CGTCAGCGTG GAAAATTTAC TAATGAGACT
CAGCCTAAAG TAGAAAACCT TCTAGATTTA GTGGCACTAG GTACGGTTGC CGATGTTGCG
CAATTAGATC GCAACAATCG CGTATTAGTT TCCAATGGAT TAAAACGGAT TCGTGCGGGA
ATATCGCAGC CCGGTATACA GGCATTGTTT CAAGCAGCCA CACGCGATAC GCGCAAAGCC
AATACCTTTG ATTTGGGCTT TGCTATCGGC CCCAGACTCA ATGCTGCTGG GCGCTTAGCT
GATATGACTT TAGGAATTCG CTTACTGCTG ACAGATAGCA CCGATGAGGC AATGGCGTTA
GCACAAGAAC TTGACCGCAT TAATCGTGAG CGTCGTGTGA TTGAAGGTGG AATGCAAGAA
ACTGCCCTCG CGCACCTAGC AGAAGATCAA CTAGCGGGAA GCATGGACCA AAGATCCAGC
ATCTGCATGT GGCATCCCGA GTGGCACCAA GGGGTTGTTG GAATTGTTGC CTCACGCTTA
AAAGAACGTT TTAACCGTCC AGCAATTGTC TTCGCTCCTG CTGCGGGCGC TACCGGTGAA
GAGTTACGTG GCTCTGGTCG CTCACTAACT GGCTTGCATC TCCGGGATGC CCTTGATATT
GTCTCTAAAC GTGAGCCAGG ACTCATTCTT AAATTTGGTG GCCATGCGAT GGCCGCCGGA
TTAACGATCC GCAAAAGTGA TTTTGAAAAG TTTGACGCCC TGTTTCAGAA TGTGGCAAAT
GATTTGCTGA CCGATGAATT ACTAGAGCGC AAACATATTC ATGATGGAGC GTTAGCCCCG
TCAGAATTCA CCCCAGAAAT TGGCGACCTG CTTGCTGAAG AAATCTGGGG CCAAGGCTTC
CCTCAGCCAG TTTTTTATGG GGAATTTGAG GTTACCCAAC AAAGTCTTAT GAAAGAAAAG
CATCTTCGCC TCATGCTTCG CCCGATTGGG GCGTCCGAAC TTGCTGCAAA CGCCAAACCA
ATTACTGCTG TTTGGTTTAA CCGTACTCAG AGCCTGCCAG CCAAAGCTAA ATTGGCTTAT
CGCCTCGTGA CCGACCGCTA CCAAGGCCAA GCCCACATAC AACTGATGAT TGAAGCCCAT
GATGAGGCAG CCAGCGCCTA A
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| Protein sequence | MSQFSHRPFS ERTATWLQQS GLHPLLARLY AARGLESPED LSLELRNLIS PKELKNCLST
ASLLADILEK KEPMLIVADY DCDGATACAV GLRGLRMLGG PDTPIQFLVP NRFTMGYGLT
PEVVELAAQQ IPKPKYLITV DNGIASEAGV DRARELGMEV IVTDHHLPGD RLPKATAIVN
PNQPGCSFPS KALAGVGVMF YLLVALRAEL RQRGKFTNET QPKVENLLDL VALGTVADVA
QLDRNNRVLV SNGLKRIRAG ISQPGIQALF QAATRDTRKA NTFDLGFAIG PRLNAAGRLA
DMTLGIRLLL TDSTDEAMAL AQELDRINRE RRVIEGGMQE TALAHLAEDQ LAGSMDQRSS
ICMWHPEWHQ GVVGIVASRL KERFNRPAIV FAPAAGATGE ELRGSGRSLT GLHLRDALDI
VSKREPGLIL KFGGHAMAAG LTIRKSDFEK FDALFQNVAN DLLTDELLER KHIHDGALAP
SEFTPEIGDL LAEEIWGQGF PQPVFYGEFE VTQQSLMKEK HLRLMLRPIG ASELAANAKP
ITAVWFNRTQ SLPAKAKLAY RLVTDRYQGQ AHIQLMIEAH DEAASA
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