| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1468 |
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| Symbol | |
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| ID | 5052400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1545030 |
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| End bp | 1546292 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471641 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_001156246 |
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| Protein GI | 145589649 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAGAC TACCTATCGA GCTAGAAATT GGCTTACGCT ATACCCGCTC CAAGCGCCGT
AAGACGGTTG GAAAGCATGA TGGCTTCCTT TCCTTTATTT CTGGGATTTC TACGGCGGGC
ATTGCTTTGG GTGTCGCTTC CCTGATTGTT GTTCTTTCGG TCATGAATGG ATTCCAAAAG
GATGTACGCG ATCGGATGCT ATCCGTTCTT TCGCATGTGG AAATTACTGC TCCTGATGGA
TTGGCTAATT GGGAGCCCTT GGCCTTAAAA GTGGCTGCAC AACCTCACGT AGTGGGCGTA
GCTCCTATGG TTGCCTCACA AGGTTTATTG AGCCGCGACA ATGTTATGCG GGGTGTTGCT
ATTCGAGGAG TCTCTCCAAG TGAAGAAGGT AAAGTTTCTG ACTTACCTAA GCAATTTGTG
GCTGGCTCTA TTAATGATTT AACGCCAGGT GGTTTTGGTG TAGCGCTAGG CGCGCAGTTA
GCCGCATTAG TTGGTGCACA CGTTGGCGAT CGCATTAATT TAATTGTTCC TGAGAGTGAT
TTAACTCCGG CCGGTGCAAT GCCGCGGATG CGTACATTAC AAGTTGTAGG CATTGTAGAT
AGCGGTCATT ACGAGTTCGA TAGTTCTTTG GCGATCATGC ATTGGAAAGA TGCAGCGGCT
TTATTACGTC TGCATGACCC CTCAGGCTTA CGCGTTAAGG TGGACGATAT GCAGCGGGCG
CCAGAGGTGG CTAATGAGTT GGCAGCAGTA GTGCCCCAGG CCTTATGGGT GACAGACTGG
TCACGCTCAA ATCGCAATTG GTTTGCAGCC GTCCAGACTG AGAAAAAAAT GATGTTCATT
ATTCTTACCT TAATTATTGC TGTTGCTGCA TTTAACTTGG TTTCAACGCT GGTGATGACG
GTTAATGAAA AACAAGCGGA TATTGCTATT CTTAGAACGA TGGGCGCGAG CCCTGGATTA
ATTCAAAGAA TATTTTTAGT ACAAGGTTTA GCTATTGGCC TCTTAGGATC TTTAGCGGGC
GTTGGTTTAG GTTTATTAAT CGCACTCAAT ATTGATGTCA TTGTTCCAAC AATAGAAGCG
ATCTTCCGCG TGCGTTTCTT GCCACGTGAT GTGTATTTCA TCAGCGAGCT TCCATCCGAC
GTGAGGTTGA ATGATGTTGT TACCGTTGGC TTGATGGCCT TTGGATTATC TGTGCTCGCA
ACGCTGTACC CAAGTCGTCG CGCAGCCAAA GTACAACCTG CGGAGGCCCT ACGCTATGAG
TAA
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| Protein sequence | MLRLPIELEI GLRYTRSKRR KTVGKHDGFL SFISGISTAG IALGVASLIV VLSVMNGFQK
DVRDRMLSVL SHVEITAPDG LANWEPLALK VAAQPHVVGV APMVASQGLL SRDNVMRGVA
IRGVSPSEEG KVSDLPKQFV AGSINDLTPG GFGVALGAQL AALVGAHVGD RINLIVPESD
LTPAGAMPRM RTLQVVGIVD SGHYEFDSSL AIMHWKDAAA LLRLHDPSGL RVKVDDMQRA
PEVANELAAV VPQALWVTDW SRSNRNWFAA VQTEKKMMFI ILTLIIAVAA FNLVSTLVMT
VNEKQADIAI LRTMGASPGL IQRIFLVQGL AIGLLGSLAG VGLGLLIALN IDVIVPTIEA
IFRVRFLPRD VYFISELPSD VRLNDVVTVG LMAFGLSVLA TLYPSRRAAK VQPAEALRYE
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