Gene Pnuc_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1440 
SymbolfabZ 
ID5052797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1510850 
End bp1511299 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content44% 
IMG OID640471612 
Product(3R)-hydroxymyristoyl-ACP dehydratase 
Protein accessionYP_001156218 
Protein GI145589621 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00460863 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACC CTATCGCGAT TGATATCCAC AAAATTTTGC AGTTATTGCC ACATCGCTAT 
CCATTTTTAC TGGTAGATCG CGTTCTGGAA ATAACGCCTC GCGAAACCAT TACCGCCTTA 
AAAAATGTCA CGATGAATGA GCCATTCTTT CAGGGGCACT TTCCTGATTT CCCGGTGATG 
CCTGGAGTAT TAATTATTGA GGCGTTAGCT CAAACAGCTG CATTGCTAAC ATTTTCCGAA 
GAGCGTGCTG AAGATGCAAT TTATTACTTT GCTGGTATTG ATGGTGCCCG TTTTAAAAAA 
CCAGTACTTC CCGGTGATCA ATTGATTATG ACTGCGAGGC TAGAGCGTGG TCGCGCAGGT 
ATTTATAAGT TCGCAGTTCA GGCAACTGTG GATGGTGAAA TCGCTGCAGA AGCCAATATT 
ACTTGTGCGG TACGTTCGAA AGGCGCGTAA
 
Protein sequence
MSNPIAIDIH KILQLLPHRY PFLLVDRVLE ITPRETITAL KNVTMNEPFF QGHFPDFPVM 
PGVLIIEALA QTAALLTFSE ERAEDAIYYF AGIDGARFKK PVLPGDQLIM TARLERGRAG 
IYKFAVQATV DGEIAAEANI TCAVRSKGA