Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1435 |
Symbol | |
ID | 5053327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1506073 |
End bp | 1507374 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640471607 |
Product | secretory lipase |
Protein accession | YP_001156213 |
Protein GI | 145589616 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.765919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTT TTGGATGTGC TTTAGTTCAG ACTCTTGTCT GCAGCCTATT CATATCGATG AGTGCTATGG CCACCCCCTC GATACCACCC TTTTATGTTG CCTCATCTCA AATTAGGCCC GAAGGAAAGC TCGGTCAAGT TGTCAAAAAA GAAAAAATAG CTACAGAAAT TGCTGGTGCA CAGGCTTGGC GGATTGCTTA TATTTCTTCT GATGTGAATA ATCTCAAAAC CATTTCCACT GGCTTATTGA TCGCACCCAT TGGTCAGGCA CCTAAGGGCG GACGACCGAT TGTTTCTTGG TCACATGGCA CAACAGGCAG CGCACAGAAT TGCGGCCCCT CTCAACAAAT TAATCCAGCA GTACCTCTAA ATGAATACTA TCTAATGAAT GGTAATTCTT GGGAGGATTA TGGAGTTCTT TCTTTGGCTG AATTAATCAA AGAAGGATAT GTTGTTGTAG CAACTGACTA TCAAGGTCTT GGTGGTGGCG GTAAGCATCA ATATGCAGTT GGGCAAACTC AGGGTCGTGA TGCGATTAAT GCTATTCGGG CTGCTGGCTC CGTTAAGGAG GCTGGTGCCG GTAAAAAAGC TTTGTTATAC GGCTGGTCTG AGGGCGGTTA CTCCGTTCTT TCTGCTGGTG GATCTAAGGA ATACTTAGCG CAAACTGGTA CTGCTTTTGA TGGCATTGAA CTAGTGGGTG TTGTCGCTTT ATCTCCAGTT AACCTCTCGG GTGTTGCTCA ATACGCCATG ATGAGTAGTA GTGATAATGT AGATCAGGCC ATGGAGAAAA TTACTGCACC GCTTTCACAA AACATTTTTT TATGGGGTCA TCTAGCAGGG ATGATGTATG GCATGCAGGC GGCCTATCCG GAAAAGTTAC AGCTTACTGA TTGGTTTACG CCTGAAGGTG CTGCGGTGTT TGATCAACTT TCCAACAATA AATGCTTCCA TGTATTGAGT GATGCATTGA CCTATAGTTA CGGAGATAAT TACAAATCCC TAGTGAAGTC AGTGCCGATC AATACTCAAG CTTGGATTGA GGTAATGATT ACCGGCGGTA TACCCAATAA CGCTCCTGCG GTGCCAGTGC TAGTGTTTCG TGGAACTAAA GACGCGGTTC CCAAGCCGAT GGTCGATATC TATGAAGCTC AGATGTGCAA AATGGGTGGC AATATACAGC ATATAGAGTT GGATGGGGCA ACTCACTTCA CTAGCCCATT AGAGGCGCAG CAAACTTTCT TACCCTGGAT CAATGATCGG TTCGCTAATA AACCTCTGGC TAATCGATGT CCGCAAAACT AA
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Protein sequence | MKRFGCALVQ TLVCSLFISM SAMATPSIPP FYVASSQIRP EGKLGQVVKK EKIATEIAGA QAWRIAYISS DVNNLKTIST GLLIAPIGQA PKGGRPIVSW SHGTTGSAQN CGPSQQINPA VPLNEYYLMN GNSWEDYGVL SLAELIKEGY VVVATDYQGL GGGGKHQYAV GQTQGRDAIN AIRAAGSVKE AGAGKKALLY GWSEGGYSVL SAGGSKEYLA QTGTAFDGIE LVGVVALSPV NLSGVAQYAM MSSSDNVDQA MEKITAPLSQ NIFLWGHLAG MMYGMQAAYP EKLQLTDWFT PEGAAVFDQL SNNKCFHVLS DALTYSYGDN YKSLVKSVPI NTQAWIEVMI TGGIPNNAPA VPVLVFRGTK DAVPKPMVDI YEAQMCKMGG NIQHIELDGA THFTSPLEAQ QTFLPWINDR FANKPLANRC PQN
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