Gene Pnuc_1385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1385 
Symbol 
ID5052115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1455713 
End bp1456291 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content41% 
IMG OID640471557 
Productsuperoxide dismutase 
Protein accessionYP_001156163 
Protein GI145589566 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACATA CATTACCTCC GTTGCCATAT GCTCTAGACG CACTTGCGCC CCACATTTCA 
AAAGAAACAC TTGAGTATCA CTACGGCAAG CATCATCAAG CTTACGTTAC CAACTTAAAT 
AATTTGATTA AGGGTACAGA GTTCGAGGCT TTGAGTTTGG AAGACATTAT TAAAAAATCT 
GCTGCTGGTG TTTTTAATAA TGCTGCCCAG GTATGGAATC ACACCTTCTA TTGGAATAGC 
TTAAAGCCAA ATGGTGGTGG AGCTCCTACA GGCCCTTTGG CTGATGCGAT TAATGCTAAA 
TGGGGTTCAT TTGATAAATT CAAAGAAGAG TTTAATAAGT GCGCAGTAGG TACATTCGGT 
TCTGGTTGGG CATGGTTGGT TAAGAAGGCT GATGGTAGTT TGGATTTAGT ATCTACCAGC 
AATGCAGCAA CACCATTAAC CACGGATGCA AAACCGCTAC TCACTTGCGA TGTTTGGGAG 
CATGCCTACT ATATTGATAC TCGCAATGCA CGCCCAAAAT ACTTGGAAAA CTTTTGGAAT 
GTAGTGAATT GGGATTTTGC GAGCAGTAAT TTTGCATAA
 
Protein sequence
MEHTLPPLPY ALDALAPHIS KETLEYHYGK HHQAYVTNLN NLIKGTEFEA LSLEDIIKKS 
AAGVFNNAAQ VWNHTFYWNS LKPNGGGAPT GPLADAINAK WGSFDKFKEE FNKCAVGTFG 
SGWAWLVKKA DGSLDLVSTS NAATPLTTDA KPLLTCDVWE HAYYIDTRNA RPKYLENFWN 
VVNWDFASSN FA