| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1362 |
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| Symbol | |
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| ID | 5053715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1433211 |
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| End bp | 1434626 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471534 |
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| Product | RNA-metabolising metallo-beta-lactamase |
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| Protein accession | YP_001156140 |
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| Protein GI | 145589543 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTC AGTTTTTTGG GGCTGCTGGT GAAGTTACCG GGTCAAGACA TTCGGTTGAG
GTGATGCTGT CTGGCAAGCC AAGGCACTTC ATGGTGGACT ATGGGCTTTT CCAAGGCGGT
CGTGAGGCCA ATACTAAGAA TTTAGAACCA CTTCCTTTTG CAGCGAAGGA CATTGAGTTT
GTAGTTCTGA CTCATGCGCA TATTGATCAC AGCGGCTTAT TACCCCGTTT ATGCGCCCAA
GGTTTTAAGG GGTCCATATA CTGCACCCCG GCCACGTATG AGCTACTTAA AATTTTATTG
CCAGATAGCG CTCACTTGCA ATTGGCAGAT CTAGAGCGCG CAGAGCGAAA AATGAAAATG
GGTAAATGGC GTGGTGAGAT GCCATTTGCG CTGTACTCAA GAGAAGAAGT GGAAATGACT
CTGGCGCAAT TTGAAACGGT GGAATATGGT CAGATTCACG AGATCACTCC AGGTATTAAA
TTGGAATTTC GAAATGCAGG ACATATATTG GGTTCTGCGA TTGCTGTGTT AGATATTCAA
GAAGATGGCG CCCAGAAAAA ACGTTGTGTG TTTTCGGGGG ATATCGGGAT GAAGGGTAAG
GTGTTGATGC CTGACCCGGA TTTGATCTCT GAAGCAGATG TTGTGCTGAT TGAATCTACC
TATGGTGACC GTTTGCATCG AAGTTTAAGT GAGACTGAGG AGGAATTAGT GGAGGTAATT
TCCTCTACGA TGGCCGCCAA GGGCAATATA GTTATCCCCG CTTTTGCGGT TGGTCGCACA
CAAGAGATCT TATTTCTCCT GATTGATTTA GTCAGAAAAG AAAAACTACC GCATTTAGCG
ATTTGGGTAG ATTCACCTAT GGCTACTGCT GCTACTCACT TAACGCATCA TTTCTTTTCT
CAGCTCGATG CACAGTCACA AGCTACATTT CAGTGGTTTC AAAACCATCC AGAGGCACTC
GATTTACGCT TCATTGCTGA CGTAGAAGAA TCTAAAGCCT TAAATAAGAT TAAAGGCGGG
GCAATTATCA TTTCTGCTAG TGGAATGTGT GATGCCGGAC GTATTGTCCA TCACCTTGCC
AATAATTTGC CGCGCTCTCA AAATGCAGTC ATCATTACTG GCTTTCAAGC ATATGGAAGT
CTTGGCCGGC AACTAGTTGA TAAGGTAGAG AAGGTTCGAT TGTTTGGTGA GGAAGTCTTA
GTGAAGGCTT CCATTCACAC CATCGGTGGG CTCTCGGCCC ATGCTGATCA AGCAGGCCTA
CTGGATTGGT TAAGGGGCTT TAAAAAGCCG CCTAGTAAAG TATTTGTTGT GCATGGTGAA
CCTGAGTCTT CAACAGCTTT CGCAAGCTGT ATTCGGGATC AACTCAATTG GAAAGATGTT
ATTGTTCCCG AGCGTCTACA CACATACGAT TGTTGA
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| Protein sequence | MKIQFFGAAG EVTGSRHSVE VMLSGKPRHF MVDYGLFQGG REANTKNLEP LPFAAKDIEF
VVLTHAHIDH SGLLPRLCAQ GFKGSIYCTP ATYELLKILL PDSAHLQLAD LERAERKMKM
GKWRGEMPFA LYSREEVEMT LAQFETVEYG QIHEITPGIK LEFRNAGHIL GSAIAVLDIQ
EDGAQKKRCV FSGDIGMKGK VLMPDPDLIS EADVVLIEST YGDRLHRSLS ETEEELVEVI
SSTMAAKGNI VIPAFAVGRT QEILFLLIDL VRKEKLPHLA IWVDSPMATA ATHLTHHFFS
QLDAQSQATF QWFQNHPEAL DLRFIADVEE SKALNKIKGG AIIISASGMC DAGRIVHHLA
NNLPRSQNAV IITGFQAYGS LGRQLVDKVE KVRLFGEEVL VKASIHTIGG LSAHADQAGL
LDWLRGFKKP PSKVFVVHGE PESSTAFASC IRDQLNWKDV IVPERLHTYD C
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