Gene Pnuc_1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1334 
Symbol 
ID5052690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1411598 
End bp1413235 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content48% 
IMG OID640471506 
Productmajor facilitator transporter 
Protein accessionYP_001156112 
Protein GI145589515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCATC TATTAGATAA AGAACGCACT ATTGCAGGCC CAGGCTTTAA TCGCTGGCTT 
GTTCCACCAG CGGCACTAGC AATACATTTG TGCATTGGTA TGGCGTATGG CTTCTCCGTA
TTCTGGCTGC CATTATCCAA AGCCTTAGGA GTTTCGCAGG GTGGTACAGA AGCCATTAAA
TGTGCTGCTG ATGTTGGTTT CTTTGCACAA CTCTTTACAA CTAGCTGCGA TTGGCAAATA
TCTACGCTTG GTTGGATGTA CACCATGTTT TTTGTGCTGC TTGGTTCTTC TGCTGCCCTT
TGGGGTGGCT GGTTAGAGCG TGCAGGCCCA CGTAAAGCCG GCGTTGTTGC TGCATTCTGT
TGGTGCGGCG GCATGCTGTT CTCAGCATTG GGGGTTTATC TCCATCAGTT TTGGATGATG
ATTCTGGGTT CAGGTGTGAT TGGTGGTATC GGCTTGGGTC TTGGCTATAT CTCTCCAGTG
TCCACATTGA TTAAATGGTT TCCAGACCGT CGCGGTATGG CAACGGGTAT GGCGATTATG
GGCTTTGGTG GCGGTGCGAT GATTGGTTCA CCACTAGCCG CAAACCTCAT GAAGTATTTT
GCTACCCCAA CCAGTGTTGG TGTGGCGCAA ACATTTGTTG TAATGGCATT GGGTTACTTT
GTTTACATGA TGGCTGGTGC ATTTGGTTAC CGCATTCCGG CTAGTGACTG GAAGCCCGCT
GGTTGGACTC CACCAGCAAG TCAAGCCAAT AACGCCATGA TTACGAGCCG TAGTGTAAAC
GTTAAAAAAG TATGGGGCAT TCCACAGTTC TGGTTGGTAT GGATGGTTCT CTGCATGAAC
GTTTCTGCTG GTATTGGGGT GATTGGTATG GCTTCACCAA TGTTGCAAGA AGTATTTGCA
GGTAGCTTGA TTGGCGTTAC TCAAACTTTC ACAGAGCTTG ATAAGACTCA GCTCACTGCT
ATTGCAGGTG TTGCGGCTGG TTTTACTGCA TTGTTGAGCC TCTTTAACAT TGGCGGTCGC
TTCTTCTGGG CCAGTTTGTC TGACAAGTTA GGTCGTAAGC TCACCTACAT TATTTTCTTT
GTGCTGGGTG GCGTTCTTTA CTTCAGTATT CCAAGCAGCG CGGCAGCTGG CAATCTGCAC
TTATTTGTTG GTGCCTTCTG CATCATCTTG AGTATGTATG GCGGCGGCTT TGCAACCGTT
CCTGCATATC TTGCCGACCT GTTTGGTACG CAAATGGTAG GGGCAATTCA TGGTCGCTTG
TTAACTGCAT GGGCTACTGC CGGCATCTTG GGTCCAGTTG TAGTGAATTA CATGCGCGAC
TATCAGTTGA GCTTGGGCTT ACCACGTGCA CAGGTATACA ACCAAACGAT GTATATCTTG
GTGGGCATGC TGGCGATTGG ATTAATTTGT AATTTGATGA TTCGTCCAGT GGCCGATAAG
TGGTTTATGA CTGATACTGA ACTAGCTGAA GAGAAAAAGC TGGCCCATGA GAAAGCGCTT
GATTCAGTGG TTAAAGGCGC GGGTGGTAAT GAGCATACTT CTGCCGCAGC TGTTTACTTA
GCTTGGGCTG CCGTTGGAGT TCCACTTGCT TGGGGTGTGT ATAAAACCTT CTTAAGCGCT
TTAAAGTTGC TAGCATAA
 
Protein sequence
MFHLLDKERT IAGPGFNRWL VPPAALAIHL CIGMAYGFSV FWLPLSKALG VSQGGTEAIK 
CAADVGFFAQ LFTTSCDWQI STLGWMYTMF FVLLGSSAAL WGGWLERAGP RKAGVVAAFC
WCGGMLFSAL GVYLHQFWMM ILGSGVIGGI GLGLGYISPV STLIKWFPDR RGMATGMAIM
GFGGGAMIGS PLAANLMKYF ATPTSVGVAQ TFVVMALGYF VYMMAGAFGY RIPASDWKPA
GWTPPASQAN NAMITSRSVN VKKVWGIPQF WLVWMVLCMN VSAGIGVIGM ASPMLQEVFA
GSLIGVTQTF TELDKTQLTA IAGVAAGFTA LLSLFNIGGR FFWASLSDKL GRKLTYIIFF
VLGGVLYFSI PSSAAAGNLH LFVGAFCIIL SMYGGGFATV PAYLADLFGT QMVGAIHGRL
LTAWATAGIL GPVVVNYMRD YQLSLGLPRA QVYNQTMYIL VGMLAIGLIC NLMIRPVADK
WFMTDTELAE EKKLAHEKAL DSVVKGAGGN EHTSAAAVYL AWAAVGVPLA WGVYKTFLSA
LKLLA