Gene Pnuc_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1332 
Symbol 
ID5052694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1410137 
End bp1410760 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content43% 
IMG OID640471504 
ProductFMN-binding negative transcriptional regulator 
Protein accessionYP_001156110 
Protein GI145589513 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCTGC CGAAACACTT TGCAGTCATA GAGCCAGCCT TACTAGCACA GCTAATCTCT 
GAGTACCCAC TTGCTACATT GGTTGGAAAT CTAGATAGCC ATCTGGAGAT TAATCATCTG 
CCCCTCATGT TAAGCGCAGA CAAAACTAAA CTTTATGGTC ATATCGCCAA AACGAATCCA 
CTATCAAAAA TTGCTACGAG CAAGGCTACA GCAGTAACAG CAGTATTCAA TGGTCCAAAT 
GCATATGTCA CCCCCGCTTG GTATCCATCC AAAAAAGAAA CCGGGAAAGT AGTGCCAACA 
TGGAACTATG CAGTAGTTCA TATTGAGGGC AATATTAAAT TAATAGAAGA TCCTCAGTGG 
CTTAGAAGTC ATGTGGCGCA GATGACCAAT ATTCATGAGC CCACCTATCA ATCTGACTGG 
AAGCTCGATG ACGCGCCAGA GGAATATGTG CAGATGATGC TTAAGGCCAT CGTAGGCATT 
GAGATAGATA TTCAGAATAT AGTCGGAAAA TTTAAGCTCA GCCAAAACCG TCCAGCCGAA 
GATTACGCTG CAGTTGTAGA TGAGCTAAAG CAATCTCCAC AAGAAGCGCT TCATGAGATG 
CTCAAATACA TGAAGCCCAA TTAA
 
Protein sequence
MYLPKHFAVI EPALLAQLIS EYPLATLVGN LDSHLEINHL PLMLSADKTK LYGHIAKTNP 
LSKIATSKAT AVTAVFNGPN AYVTPAWYPS KKETGKVVPT WNYAVVHIEG NIKLIEDPQW 
LRSHVAQMTN IHEPTYQSDW KLDDAPEEYV QMMLKAIVGI EIDIQNIVGK FKLSQNRPAE 
DYAAVVDELK QSPQEALHEM LKYMKPN