Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1306 |
Symbol | |
ID | 5052217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1382639 |
End bp | 1385623 |
Gene Length | 2985 bp |
Protein Length | 994 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640471478 |
Product | hypothetical protein |
Protein accession | YP_001156084 |
Protein GI | 145589487 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3893] Inactivated superfamily I helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.791013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCAGC CATTTCCGAT GCTTACTGAA CAGCAACAGC CATATAGCTG GGCTATCACG CCTAATGCTG GTGCTCTGAA GGAACTCGCC AATGGAATTT GGAATTGTGC AGTGCAAACT AATCAACGCC CCTTAGTGGT GCTTAGTACG GCAGGACCTT TAATGGGGGT GAGAAGGGCG CTGGAAGTAT ATCGTCCAGC CGACTTACCC AATCACCTTG CCTTTTTGCC TCAAGTCATT AGTTTTCAAG ATTGGCTGGA GGCTGCTCCA GGCGCATGGA AGTTTCCAAA AAAACAATCT GATCTAGAAA GGTGGTTAGG TGTTTACTCC ACTCTGCGTA AGCACCCCGA TCTTCAGGCA TGGTTTAAAG CTGAGAGTGA GACGGGCGCA TGGGGTCTTG CTCAAGCAAT CGTGAAGGCG TGCGATACCT TATCGAAGGC GGTAAGTCCA CATCTTCAAA AACAGATTCA TGTATTCATG CAGCAGTATG AAAGCGATCA AGATCAGCAG AACAAGATAG GTGAAGTTTG GGGGCGTGAA GTTCAAACGT TGCTAGATGC CACTATTCAA GAAGCATATC GTGGCATGGC GCGTAAGGTG GTAGACCAAG AGGCAAACGT ATTGCTTACT TTCTGGCGTT ATACCGCCAG TGTGAGTGAC CCCGCTTTTC GCAATCAGTT TGCGATTGCA GCCCACCTTC ATGCACTTGC ACAAGCGCAA GCAGTCCATC AAGCGCGACC ATTAATTTGG GTTGAAACCG CAGATCCCAC TCCAATTGAT CAAGAAATTA TTGCTGATTT ACTTCATCAA TATGCTCAGC TTGCACCCGC AATAGAAGTC AAGATGGATT GGAGCGCTGT GGGTTTGTGG CCCGAAGCAA TACAGGGCGG TGACAAGTCA ACGCAAGCTG TCCAGAATGT GCATCATGCT CAGATTGAAG GTTGGAGACT AGTTTCTGCA AAACGATTTG AAGAGCTGGC ATGGACTGCA GCAAAAACAA TTGAGCAGCA TCTGATTGAT GGCAAAACCA ATTTAGCATT AGTAGCTCAA GACCGTTTAG TTGCCAGAAG GGCGCGCGCC TTGTTGGCTA GGTTAGGGCC TGCATTAAAT ATTGCTGATG AAACTGGCTG GAAGCTTTCT ACTACCCGCG CTGCTGCTGC ACTCAATAGT TGGCTAGAGT TAATTCAGTC ACCTAAAGAT GGGCCAAGCG TCAAAGTTCT ACTTGAGTTC TTGCAAAATC CTTTTTTAGA TATTGAAAAA ATCCTGAATC GAGAAAAAGA TTTCTGCATC GGATTGATTG CAGAGCTTGA AGATATTTTG ATGGCAAGTA AAGCGGAATC CGGATGGACT ACTTTTTATT TAGCCATCGA GCGCGCACAG CAATATGCCG TTAAAACTGC GTCTGCTATA CCAAGCTCAG CTTTGTTAGA GCTCTTGCAG TTCGTCAGAG AGCGTCATCA TGAGTGGTCA AAACTAAAGG TTGATTGCAA TAAAGCTTAT AAGCTTTTAC AGGCCAATCT GCAGGCCACT GGCATGGCGA CTAGCCTAGA AAAAGACTCT GCTGGTAAAC AGTTATTAGA GGTCTTGAAG AGTTTTGATT TGCATCGCCC CGACCATCAA CTGACTGTAA TGCGTTTGAA TGAATGGCTC AGCTTGATCA AAACGGTAGT GGAGGGTGCT AGCTATCAAG AGGAGGGTGG GGATGCTAGG GCCAATTTGA GCATTCTGCC TCTAAGCTCT GCCCGTTTAA GAGAATTTGA TGCCATCGTA TTGGTGGGTT GTGATGAGCA GCAGCTTCCA GCCTATTCTG AGCCGCCTTT ATTTTTTTCG GATGCCTTAA ATCAATTGCT CAAGACATCT ACCATTGAGA TGCAATTTGT GCAGCAAGCA AGAGATCTTT CTCAGTTATT GGTTTCATGT AGCCAAGTCG ATTTACTCTG GCAAAGTAAA AGTAAGAATG GAGAACCTTT AAGACCTTCC GCTTGGATTC AACGCTTACA AAGTAAAGTT GATTGGCATG CGCTGAGCCC TCAAATACAG AAGCGGGTAT TTGAGCCCAA CCCGATTGAC ATGGCAGTAG CGCATTTTGA AGAAGATTTG CCTATGCCGC TTTCAATGAG TCCTAGTGCT TATAAGGCAT TGCGTGATTG CCCTTATCGC TATTACGTTC GCAGCTTATT GGGCTTGCGC AAAATAAAAA GTGTTGACGA AGGATTTGAT GCATCGCTAG CCGGGCAGAC CTTGCATCAG GTTTTGAAAT CCTTCTATCA CTCGCTGAAA ACGGAAGAAC ATAAAAATCC CAATCTTAAA ACGCAAGATG AGGAGCGGCA CGAATGGATG GAGGCTCGTC TCAATATGGA GTCTGAGCAA GAGTTCGCCC CTTTAATTGA GGGTGATGCG AGGGTAATGG GGGCCTTACG CGATTGGCAA AAGCAAATCC CGAGCTTTAT TGACTGGCAA TTACAACGCG AGCAAGCAGG ATGGCAGTAT TTTGATGGCG AACTAAAGGT AGGTTTTGAT TTACCTTTTG CTGATATCGA TGGCAATTTC AAAACCATTC GTATTGAAGG CTTTGCTGAT CGATTTGATA TTCATATTGA CGATAGCAAG CTTGCTTCAG TAATTGATTA TAAGAATCAG CGTTTCGAGC GAGTTAAGCA GCGTGCCGAA CATCTATTAG ATGATCCGCA ACTATTAATT TATGCGCGCG CAGCGAACGA GTCTCAAGAA AATCACAAGT TGCTTGGGCG TCAAGTAAAA CAAGCCGAGT GGGTTGCTTT AAAAGCAGAC CTCTCAAAAG AGGCGCAAAA GGCTGCTCGC TCGCAAGAGG TTCAAGAGAT GCCTGAGATG ATGATGCAAT TTTCAGCGCA AATTACCGAA GATGTACAGG GTCTTTGGTC TAAAAAACCA ATGCAAGCTT TTGCACCCGA AGGCGTTTGT CAGTATTGCG AAGCTCGCGG TATTTGTAGG AAGGGGTTTT GGTAA
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Protein sequence | MSQPFPMLTE QQQPYSWAIT PNAGALKELA NGIWNCAVQT NQRPLVVLST AGPLMGVRRA LEVYRPADLP NHLAFLPQVI SFQDWLEAAP GAWKFPKKQS DLERWLGVYS TLRKHPDLQA WFKAESETGA WGLAQAIVKA CDTLSKAVSP HLQKQIHVFM QQYESDQDQQ NKIGEVWGRE VQTLLDATIQ EAYRGMARKV VDQEANVLLT FWRYTASVSD PAFRNQFAIA AHLHALAQAQ AVHQARPLIW VETADPTPID QEIIADLLHQ YAQLAPAIEV KMDWSAVGLW PEAIQGGDKS TQAVQNVHHA QIEGWRLVSA KRFEELAWTA AKTIEQHLID GKTNLALVAQ DRLVARRARA LLARLGPALN IADETGWKLS TTRAAAALNS WLELIQSPKD GPSVKVLLEF LQNPFLDIEK ILNREKDFCI GLIAELEDIL MASKAESGWT TFYLAIERAQ QYAVKTASAI PSSALLELLQ FVRERHHEWS KLKVDCNKAY KLLQANLQAT GMATSLEKDS AGKQLLEVLK SFDLHRPDHQ LTVMRLNEWL SLIKTVVEGA SYQEEGGDAR ANLSILPLSS ARLREFDAIV LVGCDEQQLP AYSEPPLFFS DALNQLLKTS TIEMQFVQQA RDLSQLLVSC SQVDLLWQSK SKNGEPLRPS AWIQRLQSKV DWHALSPQIQ KRVFEPNPID MAVAHFEEDL PMPLSMSPSA YKALRDCPYR YYVRSLLGLR KIKSVDEGFD ASLAGQTLHQ VLKSFYHSLK TEEHKNPNLK TQDEERHEWM EARLNMESEQ EFAPLIEGDA RVMGALRDWQ KQIPSFIDWQ LQREQAGWQY FDGELKVGFD LPFADIDGNF KTIRIEGFAD RFDIHIDDSK LASVIDYKNQ RFERVKQRAE HLLDDPQLLI YARAANESQE NHKLLGRQVK QAEWVALKAD LSKEAQKAAR SQEVQEMPEM MMQFSAQITE DVQGLWSKKP MQAFAPEGVC QYCEARGICR KGFW
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