Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1285 |
Symbol | |
ID | 5051951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1356390 |
End bp | 1357553 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640471457 |
Product | GTP-binding protein, HSR1-related |
Protein accession | YP_001156063 |
Protein GI | 145589466 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAAC TCAGTCTCTT GGCTGATAGC GCCGGCTCCA TACCCACAGC CAGTGTCATT GCTCGTAAAG GTAGGACAGA CCCCGCCTTA TTTATCGGCT CCGGAAAGGC TAATGAGCTC AAGAAGGTGA TGGAAGAACA AGAAGCCGAA TTAGCCATCT TCAATCACCC TTTATCTCCA ACGCAGCAAC GAAATCTAGA GCGTCATATT GGTCGACATG TGATGGATCG CACCGGTTTG ATTTTGGATA TCTTTAGTCA ACGGGCACAA AGTCATATTG GTAAAACTCA GGTTGAACTC GCGCAGGTTC GATATCGCAT GTCACGTTTA GTAAGAGCGT GGAGTCATTT GGAACGTCAA CGAGGCGGTA TTGGTGTGCG TGGTGGTCCA GGTGAAACGC AGATGGAGTT GGATCGCCGG ATGCTAGCGA CCAAAGCAAA GCGTTTAGAA AATGAATTGG AAAAACTTCA GCGCCAACAA CGCACCCAAA GAAGGGCGCG CAATCGTAAG GATGTGTTTT CTGTATCCTT GGTTGGATAC ACCAATGCCG GAAAATCAAC CTTATTTAAC GCCTTAACTA AAGCGGGCAC CTATGCTGCC GACCAGCTTT TTGCCACTCT CGATACCACT TCTAGGAGAG TTCATTTGGA GGGGGTGGGG TCGATTGTGG TGTCAGATAC CGTAGGATTT ATCCGAGATT TGCCCCATCA ATTGGTAGAG GCCTTTAGGG CAACTTTGGA TGAAACCATT CATGCTGACC TGATTCTGCA CGTAATTGAT GCCTGTAGTC CAGTTGCTAG GGAGCAAAAG GCCGAAGTAG AGGCTGTTTT AGAAGAAATT GGGGCAGATG ACATCCCTCG GATCGAGGTG ATGAACAAGA TTGACTTGAT GCCGCAAACC TTTACTCGGG GTGCGGTTTT GGAGCGTGAT GGGCAGGGCT TCCCAAGCCA GGTTTTCCTA TCCGCCCAGA CGGGCTTAGG CCTCGATTTA CTCAGGTCAG CCCTAGCGGA ATGCTCTCAA ATGACTGATA GAATAAGGGT CGAACACAAC CGTGCCAAGA AGCAAATGGC CCCGGACGAG TTTTTAGCCC CTTTACCCGA ACGACCAGAA ACAGCTGAAT TTAACCCTAT TCCCAATCGA AGTTATCTTT CTAATGACAC GTAA
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Protein sequence | MAELSLLADS AGSIPTASVI ARKGRTDPAL FIGSGKANEL KKVMEEQEAE LAIFNHPLSP TQQRNLERHI GRHVMDRTGL ILDIFSQRAQ SHIGKTQVEL AQVRYRMSRL VRAWSHLERQ RGGIGVRGGP GETQMELDRR MLATKAKRLE NELEKLQRQQ RTQRRARNRK DVFSVSLVGY TNAGKSTLFN ALTKAGTYAA DQLFATLDTT SRRVHLEGVG SIVVSDTVGF IRDLPHQLVE AFRATLDETI HADLILHVID ACSPVAREQK AEVEAVLEEI GADDIPRIEV MNKIDLMPQT FTRGAVLERD GQGFPSQVFL SAQTGLGLDL LRSALAECSQ MTDRIRVEHN RAKKQMAPDE FLAPLPERPE TAEFNPIPNR SYLSNDT
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