| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1284 |
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| Symbol | |
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| ID | 5052740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1354889 |
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| End bp | 1356400 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640471456 |
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| Product | HflK protein |
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| Protein accession | YP_001156062 |
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| Protein GI | 145589465 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGTA AATTTCTCGG CCTATTTTCG GTCAATGATC CAGGTTGGGG CAATAACCCC
AATACCGGTG GATCTAAAGA TGCCAAAGAT GGGCAGGGCA GTGAACAAGC TCCAAAAGTA
GATCCAGATC CAGCGACTTC ACCAAATAAG CAGCCTTCCG GTCAGCCATC TAAACCAGAT
GGCCCTCCTG ATCTCGATGA ATTATGGCGG GATTTTAATG ACCGATTAGC GGGCATTTTT
GGTGGCAAGA AAAAACCGGG TGATGCTGCA AGTAGACCGA CTAGTAAGCC AAATAGCTCA
GATATTCCTC CTCCCTCAGA GCGTGGCGGA AATGGTGGCG GTAGCAATGG CGGACCTTCA
GCGCCGAACT TCAATTTCAC AAACCCATTT AGTTCCAAGA GCGGCTCATT GGTCGCAATT
GCAGCCGTCT TCTTTATTTG GGTATGCAGT GGCTTCTTCA TTATTCAAGA AGGTCAAGCC
GGAGTCGTTA TGACTTTTGG AAAGTACGAT TACACCGCTA AGCCAGGCAT TAATTGGCAC
CTGCCTTGGC CGATTCAGTC AGCTGAAACG GTCAACCTTT CTGGGGTACG CTCAGTTGAG
GTGGGGCGTC CTACTTTGAT TAAGGCAACC AATCAAAAAG ATTCTTCAAT GTTGACTGAA
GATGAAAACA TTATTGATGT TCGCTTCGCT GTGCAATACC GCTTAAAAGA TCCAACAGAT
TATCTATTTA ATGATCGTGA TCCTGATGCA GCGGTTGTTC TTGCAGCAGA GACGGCCGTG
CGCGAGATCG TTGCTCGTAG CAAGATGGAT ACCGTTCTCT ACGAAGGGCG CGAAAAGATC
GGGATAGATT TAGCGGCCTC CATTCAGAAG ATATTGGATA GTTACAAGAC AGGCATCTAT
GTCACTAGCG TCACCGTACA AAATGTACAG CCACCAGAAC AAGTGCAGGC AGCTTTTGAT
GATGCAGTGA AGGCTGGTCA AGACCAAGAG CGTCTAAAGA GCGAAGGGCA GGCCTATGCC
AATGACATCA TTCCCCGTGC TAAGGGAACT GCAGCTCGCT TAATTCAGGA GGCTGAAGGC
TATAAGGCAC GAGTTGTGGC AACGGCAGAG GGCGACGCAG CTCGCTTTAA GCAAATTTTG
GTGGAATACT CTAAAGCTCC CCAAGTCACT CGTGATCGGA TGTACATCGA TACCATGCGT
GAGATGTACA CCAACGTCAC TAAGATTTTG GTTGATACCA CCAAGAGCAA TAATCTCTTG
TTTTTGCCGC TCGATAAAAT CATTGCGCAA GTGAGCGCTG AGAGTTCGCA GGCAGCGAAC
ACTCAAGTGA CTCAAGGTAG TGCCACAACC CCAACAGGTT CTGTCACTGT TGGCGGAGCA
ACTGGAACCA CTGCTCCTGC AACTACAAGC ACATCGACTG CACCAGCATC CGCCTCTAGC
AGCACTCCAG CGATTGAAAA AACAGTTGAT AAGCGCGATG GTTTGCGTAG TCGTGATCGG
GATTCTCGTT AA
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| Protein sequence | MTRKFLGLFS VNDPGWGNNP NTGGSKDAKD GQGSEQAPKV DPDPATSPNK QPSGQPSKPD
GPPDLDELWR DFNDRLAGIF GGKKKPGDAA SRPTSKPNSS DIPPPSERGG NGGGSNGGPS
APNFNFTNPF SSKSGSLVAI AAVFFIWVCS GFFIIQEGQA GVVMTFGKYD YTAKPGINWH
LPWPIQSAET VNLSGVRSVE VGRPTLIKAT NQKDSSMLTE DENIIDVRFA VQYRLKDPTD
YLFNDRDPDA AVVLAAETAV REIVARSKMD TVLYEGREKI GIDLAASIQK ILDSYKTGIY
VTSVTVQNVQ PPEQVQAAFD DAVKAGQDQE RLKSEGQAYA NDIIPRAKGT AARLIQEAEG
YKARVVATAE GDAARFKQIL VEYSKAPQVT RDRMYIDTMR EMYTNVTKIL VDTTKSNNLL
FLPLDKIIAQ VSAESSQAAN TQVTQGSATT PTGSVTVGGA TGTTAPATTS TSTAPASASS
STPAIEKTVD KRDGLRSRDR DSR
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