| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1254 |
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| Symbol | |
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| ID | 5053904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1319277 |
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| End bp | 1320410 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471425 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001156032 |
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| Protein GI | 145589435 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00721446 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGCAG GAAAATTGCG CAATTCGTTC AAGGGAGCAG CTTCGGCTGC TCCTTTTTTT
CCGACATTGC TCGATCAAAT GCCCAATGCC ATCGTGGTTT TTGAGGCCCA GAACCAACAA
TTGGTTTATG TGAACCAGTC TGCTGAGTCA GCACTCGATC TTTCGCGTAA ATCACTTGAG
GGTCAATCTG TGCATGATTT ATTTGGTGAG AATGAGGCAC TTGCAAGCAT GATTAGCGAA
GTCAGTCATG GCCATGTAGC CACTCAACGT CAAGAAATGT TGTTGCATTC AGTACCAGGA
AGCATTCATC AAGGCACTGT CCCAGCTCAT GTTGTCATCG CTTCCCTTGA GGATCCTAGT
TTGATCATGA TGGAATGGTT TCCAATCGAT CAGCAGTTGC GTAGTGAGCG CGATGAACGT
GTAACACAAC AGGTTGAAGC AAATAAGCAG TTAATGCGTA ATTTGGCGCA TGAAATTAAA
AATCCCTTAG GGGGTATTCG TGGGGCTGCT CAATTATTAG AGTTTGAGCT TTCTGAAAAG
GGCTTACATG AATATACCCA GGTCATTATT AAAGAGTCTG ACCGTCTACA GAGTTTGGTT
GATCGCCTTT TAGCGCCGCA CCGCAAGGCC CATGTCATTG AGGCTTTTAA TGTACATGAA
GCCTTAGAGC GTGTGCGTAG TTTGGTGTTA GCGGAATTCC CTAAAGGCTT GCGAATTATT
CGCAACTATG ACACCAGTCT ACCCGATGTC ATGGGGGATC GCGAGCAATT GATTCAGGCA
ACCCTCAATA TTGTTCATAA TGCTGCGCAA GCACTCTCCG AGGAGATTCG TTTGGGTGTT
GCGCAGATTG AATTAAAGAC CCGGGTAGCG CGTTCCGTCA CGATTGCTAA ACATCGCTAT
AAGTTAGCCA TGGATTTACA TGTAATTGAT AACGGGCCGG GGATTCCGGA AGAGATTATT
GAGCGTATCT TTTTTCCATT AGTTTCAGGG CGCGAAGGAG GTAGTGGTTT AGGCCTTACT
TTGGCGCAAA CTTTTGTTCA ACAGCACCAG GGATTTATCG CATGCGATAG TCGCCCAGGC
CGTACTGATT TTCATATTCA AATTCCATAC CGCAAGCAGG AGAAAACATC ATGA
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| Protein sequence | MSAGKLRNSF KGAASAAPFF PTLLDQMPNA IVVFEAQNQQ LVYVNQSAES ALDLSRKSLE
GQSVHDLFGE NEALASMISE VSHGHVATQR QEMLLHSVPG SIHQGTVPAH VVIASLEDPS
LIMMEWFPID QQLRSERDER VTQQVEANKQ LMRNLAHEIK NPLGGIRGAA QLLEFELSEK
GLHEYTQVII KESDRLQSLV DRLLAPHRKA HVIEAFNVHE ALERVRSLVL AEFPKGLRII
RNYDTSLPDV MGDREQLIQA TLNIVHNAAQ ALSEEIRLGV AQIELKTRVA RSVTIAKHRY
KLAMDLHVID NGPGIPEEII ERIFFPLVSG REGGSGLGLT LAQTFVQQHQ GFIACDSRPG
RTDFHIQIPY RKQEKTS
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