Gene Pnuc_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1242 
Symbol 
ID5053217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1306249 
End bp1307625 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content48% 
IMG OID640471414 
ProductMmgE/PrpD family protein 
Protein accessionYP_001156021 
Protein GI145589424 
COG category[R] General function prediction only 
COG ID[COG2079] Uncharacterized protein involved in propionate catabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.424636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCTG CACACTTATC CCGAGAACTT GCTACCTTTG CCTCTCAATT AAAACTGGAG 
GATATCCCCC CTGAGGTTAT CGAACGCGCT GAAGATTTAT TGGTCGACTG GTTTGGTTCT
GCGGTTGCAG GCAAAGGAGC ACGGGCTGTA GAAATCATTA CTCAATTTGC GCAAAATATG
GGCGGCTTTA ATGATGTACA TAGAGGCCCC TCCGAAATCA TCTCCTCTCG CAAAACGAGT
AGCCCATTTT TTGCGGCCAT GGCTAATGCT GCAGCCTCAC ATGTGGTTGA ACAAGATGAT
CTTCATAACA GCTCAGTTTT TCATCCGGCA ACTGTTGTCT TTCCACCTGC GCTCTCTTGC
GCGCAAGCGA TAGGTGCCTC AGGCAAAGAG TTTTTATTGG CCGCTATTGC TGGTTATGAA
GTTGGTATAC GTGTTGGTGA ATTTTTAGGT CGCTCACACT ACAAGATTTT TCACACTACC
AGCACAGCGG GAACGCTTGC TGCAGCCGCC GCTGTTGGAC GCTTGCTCAA GCTCAATCCC
GAACAAATGC TGCATGCTTT TGGGTCGGCT GGAACGCAAT CTGCTGGCTT ATGGGAATTT
TTACGCGACG CTGCTGACTC CAAGCAACTC CATACAGCGC ATGCTGCTTC GACCGGTTTA
ATGTCAGCCT ATATTTCGCA AGCTGGCTTT ACTGGAGCCC AGCATATTCT TGAGGGTAAG
CAAGGTTTGG CTGCCGGCAT GTCAAACGAT GCTGATCCTA GCAAGCTCAC TGATCGCTTA
GGCGCTCGCT GGGCCATCGC AGAAACTAGC TTTAAATATC ACGCCTCTTG TCGTCATACA
CACCCAGCGG CTGATGCCTT ACTGCAAGTC ATGCTTAGCA ACCATCTTCA TGCGGATGAC
ATTGCTAAAG TAGACACCTT CGTTCATCAA GGTGCAATTG ATGTATTAGG TCCTGTGACC
AACCCTAATA CAGTTCACCA ATCGAAGTTT TCCATGGGTA CAGTATTAGC ATTGGTTGCT
TATTATCGAT TTGCTGGTCT GCAAGAATTT GATGAGCATT TTCATGATCA AGCCATTTGT
GCATTTCGAG ATCGCGTGAC GATGACTTTA GATCCAGAAG TAGATGCCGC CTATCCACAA
CGTTGGACCT GTAAAGTCAA AGTACATCTC CATACTGGCC AAATATTAGA TGGTCGCATT
GATGAGCCTA AGGGCGATCC AGGTAATTCA CTGACTCGTG CAGAACTTAC TGATAAGGCA
ATGCGTCTGG CAGCCTATAG CAAAGGCGCC AGCCCAGAAG AAATGCAAAA GGCCATTGAT
CGCTTGTGGA ATATCCGCAA AGAGGTCAAG ATGGGTCCAT TGCTTCCACA AGCTTAA
 
Protein sequence
MTSAHLSREL ATFASQLKLE DIPPEVIERA EDLLVDWFGS AVAGKGARAV EIITQFAQNM 
GGFNDVHRGP SEIISSRKTS SPFFAAMANA AASHVVEQDD LHNSSVFHPA TVVFPPALSC
AQAIGASGKE FLLAAIAGYE VGIRVGEFLG RSHYKIFHTT STAGTLAAAA AVGRLLKLNP
EQMLHAFGSA GTQSAGLWEF LRDAADSKQL HTAHAASTGL MSAYISQAGF TGAQHILEGK
QGLAAGMSND ADPSKLTDRL GARWAIAETS FKYHASCRHT HPAADALLQV MLSNHLHADD
IAKVDTFVHQ GAIDVLGPVT NPNTVHQSKF SMGTVLALVA YYRFAGLQEF DEHFHDQAIC
AFRDRVTMTL DPEVDAAYPQ RWTCKVKVHL HTGQILDGRI DEPKGDPGNS LTRAELTDKA
MRLAAYSKGA SPEEMQKAID RLWNIRKEVK MGPLLPQA