Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1242 |
Symbol | |
ID | 5053217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1306249 |
End bp | 1307625 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640471414 |
Product | MmgE/PrpD family protein |
Protein accession | YP_001156021 |
Protein GI | 145589424 |
COG category | [R] General function prediction only |
COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.424636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTCTG CACACTTATC CCGAGAACTT GCTACCTTTG CCTCTCAATT AAAACTGGAG GATATCCCCC CTGAGGTTAT CGAACGCGCT GAAGATTTAT TGGTCGACTG GTTTGGTTCT GCGGTTGCAG GCAAAGGAGC ACGGGCTGTA GAAATCATTA CTCAATTTGC GCAAAATATG GGCGGCTTTA ATGATGTACA TAGAGGCCCC TCCGAAATCA TCTCCTCTCG CAAAACGAGT AGCCCATTTT TTGCGGCCAT GGCTAATGCT GCAGCCTCAC ATGTGGTTGA ACAAGATGAT CTTCATAACA GCTCAGTTTT TCATCCGGCA ACTGTTGTCT TTCCACCTGC GCTCTCTTGC GCGCAAGCGA TAGGTGCCTC AGGCAAAGAG TTTTTATTGG CCGCTATTGC TGGTTATGAA GTTGGTATAC GTGTTGGTGA ATTTTTAGGT CGCTCACACT ACAAGATTTT TCACACTACC AGCACAGCGG GAACGCTTGC TGCAGCCGCC GCTGTTGGAC GCTTGCTCAA GCTCAATCCC GAACAAATGC TGCATGCTTT TGGGTCGGCT GGAACGCAAT CTGCTGGCTT ATGGGAATTT TTACGCGACG CTGCTGACTC CAAGCAACTC CATACAGCGC ATGCTGCTTC GACCGGTTTA ATGTCAGCCT ATATTTCGCA AGCTGGCTTT ACTGGAGCCC AGCATATTCT TGAGGGTAAG CAAGGTTTGG CTGCCGGCAT GTCAAACGAT GCTGATCCTA GCAAGCTCAC TGATCGCTTA GGCGCTCGCT GGGCCATCGC AGAAACTAGC TTTAAATATC ACGCCTCTTG TCGTCATACA CACCCAGCGG CTGATGCCTT ACTGCAAGTC ATGCTTAGCA ACCATCTTCA TGCGGATGAC ATTGCTAAAG TAGACACCTT CGTTCATCAA GGTGCAATTG ATGTATTAGG TCCTGTGACC AACCCTAATA CAGTTCACCA ATCGAAGTTT TCCATGGGTA CAGTATTAGC ATTGGTTGCT TATTATCGAT TTGCTGGTCT GCAAGAATTT GATGAGCATT TTCATGATCA AGCCATTTGT GCATTTCGAG ATCGCGTGAC GATGACTTTA GATCCAGAAG TAGATGCCGC CTATCCACAA CGTTGGACCT GTAAAGTCAA AGTACATCTC CATACTGGCC AAATATTAGA TGGTCGCATT GATGAGCCTA AGGGCGATCC AGGTAATTCA CTGACTCGTG CAGAACTTAC TGATAAGGCA ATGCGTCTGG CAGCCTATAG CAAAGGCGCC AGCCCAGAAG AAATGCAAAA GGCCATTGAT CGCTTGTGGA ATATCCGCAA AGAGGTCAAG ATGGGTCCAT TGCTTCCACA AGCTTAA
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Protein sequence | MTSAHLSREL ATFASQLKLE DIPPEVIERA EDLLVDWFGS AVAGKGARAV EIITQFAQNM GGFNDVHRGP SEIISSRKTS SPFFAAMANA AASHVVEQDD LHNSSVFHPA TVVFPPALSC AQAIGASGKE FLLAAIAGYE VGIRVGEFLG RSHYKIFHTT STAGTLAAAA AVGRLLKLNP EQMLHAFGSA GTQSAGLWEF LRDAADSKQL HTAHAASTGL MSAYISQAGF TGAQHILEGK QGLAAGMSND ADPSKLTDRL GARWAIAETS FKYHASCRHT HPAADALLQV MLSNHLHADD IAKVDTFVHQ GAIDVLGPVT NPNTVHQSKF SMGTVLALVA YYRFAGLQEF DEHFHDQAIC AFRDRVTMTL DPEVDAAYPQ RWTCKVKVHL HTGQILDGRI DEPKGDPGNS LTRAELTDKA MRLAAYSKGA SPEEMQKAID RLWNIRKEVK MGPLLPQA
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