| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1228 |
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| Symbol | nusA |
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| ID | 5053470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1289930 |
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| End bp | 1291411 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471400 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001156007 |
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| Protein GI | 145589410 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00625796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGAG AAGTTCTCAT GTTGGCAGAC GCCCTAGCGC GTGAAAAGAA CGTTGATCAA
GCTATTGTGT TCGAGGCGCT CGAAATGGCG CTAGCATCGG CCACTAAGAA GCGTTATGCA
ACTGAAGATG TAGATATTCG TGTTTCCATT GACCGTGAGT CTGGTGAATA CGAAACCTTC
CGACGTTGGT TGGTTGTTCC GGATGAGGCA GGTCTTCAAG AGCCTGATAA AGAGATTTTG
CAATTCGAGG CAAAAGAACA ACTGTCAGAT ATTGAGGTTG GTGACTACAT CGAGGAGCAA
ATCGAATCTT TAGCTTTTGG ACGCATTGGC GCGCAAGCTG CTAAGCAAGT GATCTTGCAA
CGTATTCGTG ATGCTGAACG TGAACAGATT TTGAACGACT ACCTTGAGCG TGGCGAAAAA
GTCATGACTG GTACTGTCAA GCGTGCTGAC AAAAATGGTT TGATTATTGA ATCAGGTCGT
GTTGAAGCAT TGCTTCGTCG CGATCAAATG ATCCCTAAAG AAAATTTACG TTCCGGTGAC
CGTGTACGCG CATACATCCT TAAAGTGGAT CGCGAAGCAC GTGGCCCACA AATCGAACTC
TCTCGTACTT GCCCAGACTT CTTGATCAAG TTGTTTGAAA ACGAAGTTCC AGAGATGGAG
CAGGGCTTAC TAGAGATTAA GGGCGCAGCT CGTGACCCTG GTATCCGTGC CAAGATTGCT
GTTATTACTT ATGACAAGCG CATCGACCCA ATCGGTACTT GCGTTGGTGT ACGCGGCACT
CGTGTGACTG CAGTACGCAA TGAAGTTGCT GGTGAGGCAG TGGACATTGT GTTGTGGTCT
GAAGATCCAG CGCAATTCGT GATTGGTGCT TTGGCTCCAG CTCAAGTATC TTCAATCGTT
GTTGACGAAG AGCGTCATGC GATGGATGTG GTTGTTGATG AAGAGAATTT GGCTATTGCG
ATTGGCCGTA GCGGACAGAA CGTTCGTTTG GCGAGCGATT TGACGGGTTG GCAAATCAAC
ATCATGACTC CTGAAGAGTC TGCTGAGAAA ACTGAAAAAG AAGCATCTTC TGTACGTCAA
TTGTTTATGG ACAAATTGGA CGTTGACCAA GAAGTGGCTG ATATTTTGAT TGAAGAAGGC
TTTAATACGT TAGAAGAAGT GGCCTACGTA CCATTGTCTG AAATGTTAGA GATTGATTCA
TTCGATGAAG ATACTGTGAA TGAGTTGCGT ACACGCGCAC GTGATTCTTT GTTGACGATG
GAGTTGGCAA AAGAAGAGCG TATTGGCGAA GTGTCACAAG ACTTACGTTC CTTAGACGGA
ATGACTACAG AATTGATTGC CAAGCTTGCT GACAATCAAG TACATACCCG TGACGACCTT
GCTGAACTAG CTGTTGATGA GCTGGTTGAG GCGACACAAA TTGACGAAGA AACTGCGAAA
ACGCTCATCA TGAAAGCGCG CGAACATTGG TTTACTTCAT GA
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| Protein sequence | MSREVLMLAD ALAREKNVDQ AIVFEALEMA LASATKKRYA TEDVDIRVSI DRESGEYETF
RRWLVVPDEA GLQEPDKEIL QFEAKEQLSD IEVGDYIEEQ IESLAFGRIG AQAAKQVILQ
RIRDAEREQI LNDYLERGEK VMTGTVKRAD KNGLIIESGR VEALLRRDQM IPKENLRSGD
RVRAYILKVD REARGPQIEL SRTCPDFLIK LFENEVPEME QGLLEIKGAA RDPGIRAKIA
VITYDKRIDP IGTCVGVRGT RVTAVRNEVA GEAVDIVLWS EDPAQFVIGA LAPAQVSSIV
VDEERHAMDV VVDEENLAIA IGRSGQNVRL ASDLTGWQIN IMTPEESAEK TEKEASSVRQ
LFMDKLDVDQ EVADILIEEG FNTLEEVAYV PLSEMLEIDS FDEDTVNELR TRARDSLLTM
ELAKEERIGE VSQDLRSLDG MTTELIAKLA DNQVHTRDDL AELAVDELVE ATQIDEETAK
TLIMKAREHW FTS
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