Gene Pnuc_1121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1121 
Symbol 
ID5053173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1165439 
End bp1166485 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content50% 
IMG OID640471291 
Producthypothetical protein 
Protein accessionYP_001155901 
Protein GI145589304 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00939938 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATTT CAAATACAGA CTTGCAAGAG CTAGCCAAGG TTTCCTTAGA TGAGTACTTG 
CGTAATCTAC CGGTCGATCA AATCGCTGTA GAGAGACCTT TCCTTAAAAA ACTGATGGAG 
GGTCGTAAGA GCCTATTGGG CGCAAAGCAA AACGTAGTCG AGAACATCCG CAAAGAGCAT 
GGCAGTAACT TTAGCTGGGC CTTTGGGGAG GAGACGGTCA AGTTCAATAA ACGCAATACG 
ACTGAGCAGG CCTCCTTCCC ATGGAGAAGG GCGGTAGATG GTCTTTATAT CGACTATGAC 
CGACTCTTTA GTAACGGCAT CAAGGTGCGT GAGGGCGGGG CGCGTGGTTT CCAGTTGGAA 
TACAACGAGC GCGTACAACT CATCAACCTC TTGGATGAGC AGTTAGAGGT TTTAAGAGAA 
GGCTTTCTGA ATAAGTTAGA CCTAGAACTT CACCGCGACG GCTCCCACGG CGCCGATGCG 
GTAGTTGGCT TAGATAGTCT AGTCAGCATA GCGCCCGATG CTGGAACGGT AGGAGGTATC 
GATCGAGCTA AAGCAAGTTA CTGGCGTAAC TACGCTATCA AAGACATTGC CTCAACATCG 
CCTGGTAACT TAGTGGGTGA GATGGAAACC GCATGGCGTC AATGTATTAA GCATGGCGGT 
AGTCCTGATT TCATCATCGC TGGGGGTAAG TTCATTGATA CCTATCGTAA GCAAGTCACA 
GTAACCCATA TCGCTGGATC GGGTGAGACC AAGTACATCG ATGCTGGCGT AGGTGCGGGC 
GTAAATACTG GCCTAGCCTT CAAAGGGGTA GAGATCATCT GGGATCCGCA GTTTGATGAG 
CTTGATGCCA TGGCGAATCG CACGGTGGAG TGGAGCAAGC GTTGCTATTT CCTCAATACC 
CGCTTTATGA AGCTACGTGA CGACGATCTA GACATCGTTG CCCCCATCCG TCCGCACGAT 
ACCTTGGCGA TGTACGCCAT GGTGAACCTA CGCTGCGCTT TATCAATCTC TCGAGCGAAT 
GCCCATGCGG TATTGGCGAT TCAATAA
 
Protein sequence
MPISNTDLQE LAKVSLDEYL RNLPVDQIAV ERPFLKKLME GRKSLLGAKQ NVVENIRKEH 
GSNFSWAFGE ETVKFNKRNT TEQASFPWRR AVDGLYIDYD RLFSNGIKVR EGGARGFQLE 
YNERVQLINL LDEQLEVLRE GFLNKLDLEL HRDGSHGADA VVGLDSLVSI APDAGTVGGI 
DRAKASYWRN YAIKDIASTS PGNLVGEMET AWRQCIKHGG SPDFIIAGGK FIDTYRKQVT 
VTHIAGSGET KYIDAGVGAG VNTGLAFKGV EIIWDPQFDE LDAMANRTVE WSKRCYFLNT 
RFMKLRDDDL DIVAPIRPHD TLAMYAMVNL RCALSISRAN AHAVLAIQ