Gene Pnuc_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1118 
Symbol 
ID5053207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1162748 
End bp1163854 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content37% 
IMG OID640471288 
ProductSMC domain-containing protein 
Protein accessionYP_001155898 
Protein GI145589301 
COG category[R] General function prediction only 
COG ID[COG1106] Predicted ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.266234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGACTA AATTTGAGGT GGAGAATTTC AGGGGCTTTA AGAATAGGTT TATTTTTGAT 
TTATCTGAGA TTAAAAACTA TGAATTCAAC AGCGACTGTA TAAATAACGG CATCGTAAAT 
AAGGCCATGA TTTACGGCAA AAATGGGTGC GGCAAGTCAA ACTTGGGCTA CGCAATTTTT 
GATTTGATTT CTCATTTAAC GGATAAGTTT GTCCCAAGGC ACGAGTACAT TGCAAACTAT 
TTACATGCCG AACTCTCTGG GGCGCCTGCT AGGTTTAGGT ATGCCTTTAA ATTTGATGGA 
ACTAACATAG ACTACTTTTG CGAAAAAGTG GGCGTCAATG AAGTTGTTTT TGAAGAGCTG 
AAAATTGATG GTGAAACTGT TGTTCTCTAT AAAGTGGGCG AACCGATACA GATAGACTTA 
GTTGGTGCAG AGTCACTCAA CAGAGATTTA GGTGCAACTA AAATTTCAGC CCTAAAGTAT 
ATTAAAAATA ATGCAGTTCT TGATAAAAGC CCAGCCAATG ACGCACTAAA AAAGCTTTTT 
AACTTTATTG ATGGCATGCT ATTTTTCAGA TCTGTGGATG AAAGAACATT TATTGGCAAT 
CAAGCGGCTG GTGACGATAT ATTAAAAAAT ATTCTTAACA AAGGAAATCT AAAAGACTTT 
GAAGAGTTTC TTAATGCTGC AAATGTAGAG TGTGAGTTAG CGACCATCGA AGTCAATGGT 
CAAGAGGAGG TGGTTTTTAA ATTTGGTGAT AAAACCCTTA ATTTTTGGCA GGGGGCATCT 
ACTGGCACAA AGTCGCTATC ACTTTTTTAC TACTGGCTTC AGTTGCTTAA TGATGGTCAG 
GTTTCTTTGG TTTTTGTTGA TGAGTTTGAT GCTTTTTATC ATTACAAACT TTCCGAATTC 
ATTGTTGAAA AGTTAAAAGA TGCGAATGCT CAGGTTGTAC TTACTACTCA CAACACGAGC 
TTAATGACAA ATGATTTAAT GAGGCCAGAC TGCTGTTTTG TGATGGAAGA TAAGGTCATA 
ACTCCATTCT CTAGAATGAC AGATAAAGAG TTAAGATTTG CCCACAACAT TGAGAAAATG 
TATAAAGCGG GAGCTTTTGG TGGCTAA
 
Protein sequence
MLTKFEVENF RGFKNRFIFD LSEIKNYEFN SDCINNGIVN KAMIYGKNGC GKSNLGYAIF 
DLISHLTDKF VPRHEYIANY LHAELSGAPA RFRYAFKFDG TNIDYFCEKV GVNEVVFEEL 
KIDGETVVLY KVGEPIQIDL VGAESLNRDL GATKISALKY IKNNAVLDKS PANDALKKLF 
NFIDGMLFFR SVDERTFIGN QAAGDDILKN ILNKGNLKDF EEFLNAANVE CELATIEVNG 
QEEVVFKFGD KTLNFWQGAS TGTKSLSLFY YWLQLLNDGQ VSLVFVDEFD AFYHYKLSEF 
IVEKLKDANA QVVLTTHNTS LMTNDLMRPD CCFVMEDKVI TPFSRMTDKE LRFAHNIEKM 
YKAGAFGG