| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1076 |
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| Symbol | |
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| ID | 5054009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1079396 |
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| End bp | 1081720 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471245 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001155856 |
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| Protein GI | 145589259 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAACCG ATCTGCTGGA TTCTCAGTCA GACACTCCCG TCACCATCAA TAAGTTAAGT
GGTAAAAAAT CGATCATTGC CGACTTATTA GCGCAATCGA GTCGCCATTT ATTTGGGCCT
ACATCAAGCC CAACTCTCCC TTTAAAGCAT CAAGTCGTTT CGATTGAGGG GCTTTTATCT
AAGTTAACTT ACCTCAAGCC TGAAGAAGTT GTTCAGATCA AAAAAGCATT TCAATTTTCA
GATGCTGCGC ATTTAGGCCA ATATCGCCAT AGTGGCGAGC CTTACATCAC TCACCCAGTT
GCCGTTGCTG AGCTCTGTGC CACATGGCGC CTAGATGCAC CCTCCATCAT GGCTGCCTTA
TTACATGATG TGATTGAAGA TACAGGCTGC ACTAAAGCCG ATCTTGTTGA AAAGTTTGGT
AACAAGGTTG CTGAACTGGT AGAAGGGCTC ACTAAGCTCG ATAAATTAGA GTTTCAGAGT
CATGCTGAGG CGCAAGCAGA AAGCTTTCGC AAAATGTTTA TGGCGATGGC ACGAGATGTA
CGGGTGATAT TGGTAAAGCT CGCTGATCGT ACACACAATA TGCGCACCTT AGATGCGGTG
CCGATTGAAA AGCGCCGTAG AGTCGCCGCT GAAACCATTG AGATTTACGC ACCCATTGCA
CACCGCCTGG GTCTGAATAT TATTTACCGA GATTTGCAAG ACCTTAGCTT CCGCTACTCA
ATGCCGATGC GTTTCCGAGT AATTGAGGGT GCGGTTAAGC GGGCGCGGGG TAATCGCAAG
GAGATGATTG AAAAGATTTT GCAAGCATCT CGTATGGCAT TTGCAAAAGC GAATCTTGAT
GTAGATCTGC GCGGCCGTGA AAAAACGCTG TTTAGTATTT ACAACAAAAT GCGTGCCAAA
CATTTGAGTT TTTCTCAAGT GTTGGATGTA TACGCGTTTC GCGTTACGGT AGGCAGTATT
GATGAGTGCT ATCGGGCTCT AGGAATTCTG CATTCTCTCT ACAAGCCGAT GCCAGGTAAA
TTTAAAGATT ACATTGCCAT TCCCAAGTTG AATGGCTACC AGTCTTTACA CACTACTTTA
TTAGGCCCCT CTGGTGTGCC TGTGGAATTT CAGATTCGCA CTACTGATAT GCATGCGATT
GCCGAGGCGG GTGTAGCGGC TCACTGGGCC TATAAGGACG GCTCTCCAGA TATGAGCGAG
GTTCAAAACC GTGCACATCA ATGGTTGCAA TCCTTAATTG ATATTCAAGA CACCAGTGGA
GACTCTCAAG AGTTCTTAGA GCACGTCAAG ATTGATTTAT TTCCAGATGC TGTTTATGTA
TTCACCCCAG CAGGCCAGAT TAGAGCTTTG CCACGAGGCG CCACTGCACT TGATTTTGCT
TATTCCATTC ACAGTGATTT GGGTAATACC TGTGTGGCCG TAAAAATTAA TGGCTTGCAG
TTACCTTTGC GTAGTGAGTT AAAGAACGGC GACATTATTG AAGTGATTAC CTCTGCAAAT
TCTCAACCCA ACCCAGGTTG GCTGGCATTT GTGCGAACTG GTAAAGCCCG CGCCTCCATT
CGGCACTCAC TAAAAACAAA GCACTACTCA GAGTCGCTCC AATTAGGCGA ACGCTTATTG
GCCAATGCTT TGCGCCAACA AGGGGTAGAT GCTGCATTGC TGACCCCAGA AATTTGGGAA
AAGCTCATGC ACTGGACGGG TGATAAAACC CGCGAGGAAG CCTGCGTCAA TATCGCCTTG
GGTCGTAGAT CTCCTCAAGA GTTGGCTATT CGCCTCAAAA TCTTGGTAGA TGATGAGGAT
GGCGGCGAAC AAATGCGTCT TGGCACTGGG GATTGGGTTG CTCCTCAGCA GGAAGGTCAC
CACCATCAGC GCCAAGCGAT CTTAGTAGAT GGGCGCGAAG GAAATTCCAT TAGCTTCCAA
TCCTGCTGCC ATCCTATTCC AGGTGACAAC ATTATTGGTT ATCTCGGTAA AGGTGAGGGA
CTTCAGGTTC ACGCTAATGA TTGCCCTACA GCACTTCGCA TGCTATCGAA AGATAGCGAT
AAATGGGTGG AGGTGGAGTG GGGCAAAGAA CTTAATCGAG AATTTGAAGT TGATCTTGCA
ATTGATACGC GTCAAGGTAA GGGCGTATTG GCGCGAGTTG CTAGTAGCGT CACATCTGCA
GACTCCAACA TCATGAATGT TTCGATGGAA GATCGATTTA AAGAAGATTC TGTGACGATT
CGTTTTACGA TTCAGGTCTA TGACCGTCTA CATCTCTCTA AAGTGATGCG GAGCTTACGC
ACCAATCCAG ATGTGATGCG TGTGACGCGA ACTAGGGCCG GTTAA
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| Protein sequence | MQTDLLDSQS DTPVTINKLS GKKSIIADLL AQSSRHLFGP TSSPTLPLKH QVVSIEGLLS
KLTYLKPEEV VQIKKAFQFS DAAHLGQYRH SGEPYITHPV AVAELCATWR LDAPSIMAAL
LHDVIEDTGC TKADLVEKFG NKVAELVEGL TKLDKLEFQS HAEAQAESFR KMFMAMARDV
RVILVKLADR THNMRTLDAV PIEKRRRVAA ETIEIYAPIA HRLGLNIIYR DLQDLSFRYS
MPMRFRVIEG AVKRARGNRK EMIEKILQAS RMAFAKANLD VDLRGREKTL FSIYNKMRAK
HLSFSQVLDV YAFRVTVGSI DECYRALGIL HSLYKPMPGK FKDYIAIPKL NGYQSLHTTL
LGPSGVPVEF QIRTTDMHAI AEAGVAAHWA YKDGSPDMSE VQNRAHQWLQ SLIDIQDTSG
DSQEFLEHVK IDLFPDAVYV FTPAGQIRAL PRGATALDFA YSIHSDLGNT CVAVKINGLQ
LPLRSELKNG DIIEVITSAN SQPNPGWLAF VRTGKARASI RHSLKTKHYS ESLQLGERLL
ANALRQQGVD AALLTPEIWE KLMHWTGDKT REEACVNIAL GRRSPQELAI RLKILVDDED
GGEQMRLGTG DWVAPQQEGH HHQRQAILVD GREGNSISFQ SCCHPIPGDN IIGYLGKGEG
LQVHANDCPT ALRMLSKDSD KWVEVEWGKE LNREFEVDLA IDTRQGKGVL ARVASSVTSA
DSNIMNVSME DRFKEDSVTI RFTIQVYDRL HLSKVMRSLR TNPDVMRVTR TRAG
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