| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1055 |
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| Symbol | |
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| ID | 5053800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1058183 |
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| End bp | 1060351 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471223 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001155835 |
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| Protein GI | 145589238 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATGT TTAAAAAAGC AGTAAAGAGT TTTCAATGGG GCAACCATCA AGTAACGATG
GAAACAGGCG AGATTGCTCG TCAATCTGGT GGTGCCGTTA TCGTGAACGT TGACGACACA
GTAGTAATGG GCACAGTAGT TGCCTCCAAG TCTGCTAAGC CAGGCCAATC CTTTTTCCCT
TTGACTGTTG ATTACCTTGA GAAGACTTAC GCTGCAGGTA AGATCCCAGG TGGTTTCTTC
CGTCGTGAAG GTCGTCCATC AGAAGGTGAG ACATTAATCT CCCGTTTGAT CGATCGTCCA
TTGCGCCCGT TATTCCCAGA AGGCTTCTTG AATGAAGTTC AAGTGGTGAT TCATGTGTTG
TCTATCAACC CTGATGTTCC TTCTGATATT CCTGCATTGA TTGCCGCTTC TGCAGCATTA
GCTATTTCAG GTATCCCATT TGCTGGCCCA GTCGGCGCAG CACGTGTTGG TTACGCCAAT
GGTCAATACC TCTTGAACCC AACTCGCACC GAACAAGCTA CTAGCGAACT CGATTTGATC
GTTGCTGGTA CGCAAGCTGC TGTATTAATG GTTGAGTCTG AAGCTAACCA GCTTTCTGAA
GAGGTGATGT TAGGTGCTGT TGTATATGGT CATGACCAAA TGCAAACTGC CATTAACGCA
ATTAACGAAT TAGTTGCTGA AGCTGGTAAA CCAGAGTGGG ATTGGACTGC CGCGCCTAAA
GATGAGCCAT TCATTGCCAA GGTTACTGCT TTGGCTGAAG CACCATTGCG TGAGGCATAT
CAGATTCGTC AAAAAGGCGC TCGTTCAGAC AAGCTCAAAG AAATTACTAA AGAAGTAATG
GCTAAGTTGC AAGAAGAGGG CGACGTTGAC GCAGTTGCTG TTAATGACAT CTTGTTTGAA
ATCGAAGCGA AAATTGTTCG TAGTCAGATT TTGAATGGTG AGCCACGTAT TGATGGCCGT
GATACACGCA CTGTTCGTCC AATTGAAATT CGTAATGGCG TATTGCCACG TACACACGGT
TCAGCATTGT TTACCCGTGG TGAAACACAG GCTCTCGTAG TGGCAACTTT AGGTACAGCA
CGTGATGAGC AAATCATTGA TGCACTTGAA GGTGAATACC GCGATCGCTT CATGTTCCAC
TACAACATGC CTCCGTTTGC AACTGGCGAA ACAGGTCGCG TTGGCAGCCC AAAGCGTCGT
GAAATTGGTC ATGGCCGTTT AGCTAAGCGT GCTTTGATTC CAGTATTGCC AAGCGCAGAA
GATTTTGCAT ATAGCATTCG CGTTGTTTCA GAAATCACTG AATCCAATGG CTCCTCATCC
ATGGCATCTG TTTGCGGTGG TTGTTTAGCA ATGATGGATG CGGGTGTTCC AGTTAAGGCA
CACGTTGCTG GTGTTGCTAT GGGCTTGATC CTTGACGGCA ATCGTTTTGC TGTGTTGACT
GATATCTTGG GTGATGAAGA TCACTTGGGC GACATGGACT TTAAAGTAGC TGGTACTGCA
AATGGTATTA CTGCATTGCA GATGGATATT AAGGTTCAAG GTATTACTAA AGAAATTATG
CAAGTGGCTT TGGCGCAAGC TAAAGAAGGC CGTTTGCACA TCTTGAGCAA AATGCAAGAA
GCAATGGGTT CAGTTCGTAC AGAATTGTCA GCTCATGCTC CGCGTATGGT GTCATTCAAG
ATTCACCCAG ATAAGATTCG TGAAGTGATC GGTAAAGGCG GCGCAACTAT CCAAGCCTTA
ACTAAAGAAA CCGGTTGCAG CATCGATATT AAAGATGACG GCACAGTAAC TATCGCCTCA
ACAAGTGCTG AAGGCATGGC TGAAGCCAAA GCTCGCATTG AAGGTATTAC TGCTGAAGCT
GAAGTAGGCA AAATCTACGA AGGTCCAGTA GTGAAGTTGC TTGAGTTCGG TGCTTTAGTC
AACATTCTTC CTGGTAAGGA TGGCCTCTTG CATATTTCTG AGATCTCTAA CGAGCGCGTA
AAAGAAGTGA AGGATTATTT GGCAGAAGGC CAAGTGGTTC GCGTGAAGTT ATTGGCTGCT
GATGAGCGTG GTCGTTTGCG TTTATCTTTG AAGGCTGCAA TGGCTGATGA AGGTGGCACG
ATTGCTCCTT TGGCTGGTGC TGCTGAAGTG GTGGCTGAAG AAGCCCCAGC TTCTGGCGAA
TCTGCTTAA
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| Protein sequence | MTMFKKAVKS FQWGNHQVTM ETGEIARQSG GAVIVNVDDT VVMGTVVASK SAKPGQSFFP
LTVDYLEKTY AAGKIPGGFF RREGRPSEGE TLISRLIDRP LRPLFPEGFL NEVQVVIHVL
SINPDVPSDI PALIAASAAL AISGIPFAGP VGAARVGYAN GQYLLNPTRT EQATSELDLI
VAGTQAAVLM VESEANQLSE EVMLGAVVYG HDQMQTAINA INELVAEAGK PEWDWTAAPK
DEPFIAKVTA LAEAPLREAY QIRQKGARSD KLKEITKEVM AKLQEEGDVD AVAVNDILFE
IEAKIVRSQI LNGEPRIDGR DTRTVRPIEI RNGVLPRTHG SALFTRGETQ ALVVATLGTA
RDEQIIDALE GEYRDRFMFH YNMPPFATGE TGRVGSPKRR EIGHGRLAKR ALIPVLPSAE
DFAYSIRVVS EITESNGSSS MASVCGGCLA MMDAGVPVKA HVAGVAMGLI LDGNRFAVLT
DILGDEDHLG DMDFKVAGTA NGITALQMDI KVQGITKEIM QVALAQAKEG RLHILSKMQE
AMGSVRTELS AHAPRMVSFK IHPDKIREVI GKGGATIQAL TKETGCSIDI KDDGTVTIAS
TSAEGMAEAK ARIEGITAEA EVGKIYEGPV VKLLEFGALV NILPGKDGLL HISEISNERV
KEVKDYLAEG QVVRVKLLAA DERGRLRLSL KAAMADEGGT IAPLAGAAEV VAEEAPASGE
SA
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