| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1053 |
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| Symbol | tpiA |
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| ID | 5053441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1056379 |
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| End bp | 1057137 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471221 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_001155833 |
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| Protein GI | 145589236 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGACCAC TTATCGTCAT TGGCAACTGG AAAATGAACG GCAATCTTGC TAGTAATCAA
GATTGGGTCA AGACCGTTGC CCGTGGCATG GAAAGTGGCA TGCCAGCCGG ACGTAAGTTT
GCTGTATGTC CGTCATTTCC GTATTTATCT CAATGTTCTA CTTTGATTAA AGAGCATTCT
TTAGCTTTTT TAAGCTTAGG CGCTCAAGAT GTTTCTGCTC ATGGCGCTGG TGCTTATACC
GGTGAAGTAG GCGCATCCAT GCTAAAAGAA ATGGGTTGTG AATACGTCAT TGTTGGGCAT
TCAGAGCGTC GCCAGATGCA TCAAGAGGCT GATGAGTCTG TCGCAGCTAA AGCATTGCAG
GCATTAGATA GCGGCATGAC GCCAGTGATT TGTGTCGGTG AAACTGCTGA CGAGCGTAAC
TCGGGTAGGG CGGAAGAGAT TGTTTGCTCC CAAGTGGCTA AACAGGTATC AGTTCTTCAG
GATCGATTGG CTGATTGCTT GATTGCTTAT GAGCCTGTTT GGGCTATTGG CACTGGAAAA
GTAGCTAGCG CTCAAGTGGC GCAAGATATG CATCGTGCAA TTCGTATGCA ATTAGCCGAA
TTTGATGAAG ATGTAGCGTC ACATGTTGGA ATTTTGTATG GCGGCAGCGT CAAGCCTGAT
AATGCTGTCG AATTATTTGC AATGCCAGAT ATTGATGGTG GATTGGTTGG GGGTGCTTCA
CTAAATCCGC AAGACTTTCT GGCCATCTGT CAGGCATAG
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| Protein sequence | MRPLIVIGNW KMNGNLASNQ DWVKTVARGM ESGMPAGRKF AVCPSFPYLS QCSTLIKEHS
LAFLSLGAQD VSAHGAGAYT GEVGASMLKE MGCEYVIVGH SERRQMHQEA DESVAAKALQ
ALDSGMTPVI CVGETADERN SGRAEEIVCS QVAKQVSVLQ DRLADCLIAY EPVWAIGTGK
VASAQVAQDM HRAIRMQLAE FDEDVASHVG ILYGGSVKPD NAVELFAMPD IDGGLVGGAS
LNPQDFLAIC QA
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