Gene Pnuc_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1024 
SymbolrnhA 
ID5053692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1025271 
End bp1025735 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content47% 
IMG OID640471191 
Productribonuclease H 
Protein accessionYP_001155804 
Protein GI145589207 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.226266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCATT CAAAACACCC TTCGAGTCAC CCTCACATCA TTATTTATAC AGATGGGGCC 
TGTAAAGGTA ACCCTGGTCC TGGTGGCTGG GGCGCTGTAT TGCGTTCCGG GAGCCATGAA 
AAACATATTC ATGGGGGTGA AAAGCTCACT ACTAATAACC GCATGGAAAT ATGTGCGGTT 
ATTTTTGCTC TCAAAGCCCT TAAGCAGCGC AGCTCAGTAG AGCTCTGGAC TGATTCTCAA 
TATGTTCAAA AGGGGGTGAC AGAGTGGCTT GAAGGTTGGA AAAAACGGGG TTGGAAAACA 
GCTAGCAAAG ATCCCGTTAA AAATGCCGAT TTATGGCAAG AGTTAGATAC CCTACTTCCA 
GACCACGATA TTTCATGGCA TTGGGTACGG GGTCACAATG GTCACCCAGG AAATGAACTT 
GCCGACGCGC TGGCAAATAA AGGTGTGGAA GAGTTTTTAC CTTAA
 
Protein sequence
MPHSKHPSSH PHIIIYTDGA CKGNPGPGGW GAVLRSGSHE KHIHGGEKLT TNNRMEICAV 
IFALKALKQR SSVELWTDSQ YVQKGVTEWL EGWKKRGWKT ASKDPVKNAD LWQELDTLLP 
DHDISWHWVR GHNGHPGNEL ADALANKGVE EFLP