| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1021 |
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| Symbol | |
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| ID | 5053669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1022194 |
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| End bp | 1023627 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471188 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001155801 |
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| Protein GI | 145589204 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.847474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTGA TGTATGCGGT GATCCTGATT GCCGCCTTCT TATCGGGTTG TGCTAGCACC
GACTGGTCTT CGGATACACC CACTAAGGCA AACTCACGCT CCTCAAGAGC TGCTCGGGTA
AATTTAAAGA ATCAATCCGT CAGTAAGGTG TATGCACCAT CTGATAACTT ATGGATACGT
ATACGTGATG GCTTTGAAAT GGAGCCGATG AACACGCCTC AAGAGCTTGA TCAAGTTCGT
TGGTTAAGCG CAAGGCCAGA TTATGTGAAT CGGTCGATGA CCAGATCTTC ACGCTATCTT
TTTTACATCG TGCAGGAAGT CAATGCCCGA AACATGCCAA CAGAAATTGC TTTACTACCG
TTTGTAGAAA GTGCATTTGT TACAAGCGCA AAGTCTAGTG CTAAGGCGGT GGGGTTATGG
CAATTTATGC CGGCTACTGG AAAGGATTTC AAGCTGACGC AAAATGTTTT TCGAGATGAA
CGAAGGGATA TTGTCCAATC CACCGATGCT GCATTGGATT ATTTACAGCG CTTAAATAAT
CAATTTGGTA GCTGGGAGCT TGCCCTAGCA GCGTATAACT GGGGCGCCGG CAATATTCTT
AAGGCACAAA AGCGCAATAT TGCTGCTGGA TTGCCAACGG ATTATGAGAG TCTGACTTTG
CCCAATGAAA CGCGCAACTA TGTTCCAAAG TTGATGGCGT ATCGGCAAAT TGTTTTGGAT
CCAAAAGCAT ATGGAATTAC GCTTCCTGAA TTAGAAAACC ATCCTTACTT TATTGCTGTA
GATGTTGGTA GTGATATAGA CGTATCTCTA GCAATTAAGT TAGCAGAGAT TCCACCTGAA
GAATTTCAAA GCTTAAATCC ATCATTCAAT AAGCCGGTTA TTCTAAGTAA TGCAAATCAA
CAAATATTGT TGCCGTTTGC TCACGCAGAA ATATTTCAAG ATAACCTCAA GAAATACAAT
AAACCCTTGT CATCTTGGAC TGCGGTTCAA GTAAGTAAAA CAGAAAGTGT TGATCAAACT
GCTAAGAGTT TAGGTGTAGA TGCTGATACC CTTCGAGAGG TCAATGCCAT TCCAAAAGGG
ATGCGCATCA AAGCAGGCTC AACAGTATTG ATCCCAAAAA CGAGCCGTAG ACCAGGCGAT
GTATCTTCAG CGTTGGCTGA GAGCGCAAGT CTTAGTCTAG AAAAACCGCC TCCACCTGTA
CCTAAGTGCC CTAAGCCAGT CAAAGGGGCA AAAAACACAA AAGCGGCCAA ATGCGCGCCC
GTAAAAGCTT CCAAAAATAC TGTGTCGACC GCTTCTAAGG GTAATTCTTC TGCAAATAAT
GCTGCATCTC AGCATAAATC CGCATCGACA GGGCTTGCAA AATCTGCGAA AAATGCTAGT
TCGGCTACTT CAAGCAGCAA AACCAGCAGT AAGGGAGGTA GCAAAAGCCA GTAA
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| Protein sequence | MRLMYAVILI AAFLSGCAST DWSSDTPTKA NSRSSRAARV NLKNQSVSKV YAPSDNLWIR
IRDGFEMEPM NTPQELDQVR WLSARPDYVN RSMTRSSRYL FYIVQEVNAR NMPTEIALLP
FVESAFVTSA KSSAKAVGLW QFMPATGKDF KLTQNVFRDE RRDIVQSTDA ALDYLQRLNN
QFGSWELALA AYNWGAGNIL KAQKRNIAAG LPTDYESLTL PNETRNYVPK LMAYRQIVLD
PKAYGITLPE LENHPYFIAV DVGSDIDVSL AIKLAEIPPE EFQSLNPSFN KPVILSNANQ
QILLPFAHAE IFQDNLKKYN KPLSSWTAVQ VSKTESVDQT AKSLGVDADT LREVNAIPKG
MRIKAGSTVL IPKTSRRPGD VSSALAESAS LSLEKPPPPV PKCPKPVKGA KNTKAAKCAP
VKASKNTVST ASKGNSSANN AASQHKSAST GLAKSAKNAS SATSSSKTSS KGGSKSQ
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