Gene Pnuc_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0971 
Symbol 
ID5052157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp970120 
End bp971586 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content44% 
IMG OID640471136 
Producthypothetical protein 
Protein accessionYP_001155751 
Protein GI145589154 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.803854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTTTA CCTTAAGCGG CGATGACGCC TGTCGGACTA CCTTTCCCAC CCCAATTCCA 
GATCCATATT GGGTTGCGTT TTCCCCTTCG GCTTCTCAAT TAATTCATCT TGAACTGGAT 
GCTTCTGGGC TCCCAGTAGA TTCATCTTGG CTTGAGGTTT TGGCGGGCAA TCAATTAAAA 
ACATCGAGCC ATGAATTTTC AAACCCCATA GCAACTGCCT ATAGCGGTCA TCAGTTTGGA 
GTCTGGGCGG GTCAATTAGG CGATGGTAGA GCTATCTTAT TAGGTGAAAT TGCGGGCCAA 
GAACTGCAAC TCAAGGGTGC TGGTAAAACT CAATATTCCA GAATGGGTGA TGGTCGCGCG 
GTATTGCGTT CATCCATACG CGAATTTCTT TGTAGTGAGG CAATGCATGC CCTAGGCATT 
CCCACCAGTC GAGCGCTCTC AGTTGTTGGT TCGGACATGC CCGTGAGGCG AGAGACGATA 
GAGACTGCTG CAGTTTGCGC TCGATTAGCC CCCAGTTTTT TAAGAGTGGG TCATTTTGAG 
CATTATGCTG CCTCGCAAAA TCAGGTTCGC GTCAAAGAAT TGGCTGACTT ATTAATTCAA 
GAGCACTATC CAGACTGCCT TTCTAGCAAA GATCCTTATT TAGAATTATT TAAACAAATT 
TGCATCCGCA ATGCTGAGCT AGTGGCGCAA TGGCAGGCGG TAGGCTTTTG TCATGGTGTT 
TTAAATAGCG ACAACATCAG CGCAATTGGC ATTACGCTTG ACTATGGCCC ATTTGGTTTT 
TTAGATGAAT TTCAAATCGA TCATATTTGC AATCACAGTG ATCAAGCTGG TAGATATGCC 
TACCATCGCC AACCCCAGAT CATGCATTGG AATATGGCTT GTTTGGCAAG CACCTTTATA 
CCGTTGCTAG AAAATCAATA TTCAGAAGAA AAAGCTCAAG ATATTCTCCG CGATGCGCTG 
GAAATCTTCC CCAAAAGCTA TGCGTCCACT TGGCAATCCC TTTTCAGAAG AAAACTGGGC 
TTTGCTATAG ACCATGAAAA TGACATCAAG TTGGTGGAGC GATTACTTCA GGCAATGCAT 
GATTCACGCG TAGACTTCAC CACCCTCTTT CGCAAACTCA GTGATATTAA GAAAACGGAT 
TGCGTAGATG CGATTGCCTT AAGAGATGAA TTTATAGATC GTGTATCCAT AGATCAATGG 
TTGTCAGATT ATCTTTTGCG ACTACAGATG GAGCTTGATG ATGATGCGAC AAGGAAAATA 
AAGATGGATG GGGTAAATCC AAAGTTCATA CTACGCAATC ACTTAGCCCA AGAAGCAATT 
AATAAGGCGC AACAGCATGA TTATGCTGAG ATAAAAACCC TGCTTAATAT TTTGAGCCGT 
CCATTTGATG ATCAGCCTCA GCATGAAAAA TATGCCATAG CACCCCCAAA AGATCTGCAA 
AAAGTCGATG TGAGCTGCTC TTCCTAA
 
Protein sequence
MAFTLSGDDA CRTTFPTPIP DPYWVAFSPS ASQLIHLELD ASGLPVDSSW LEVLAGNQLK 
TSSHEFSNPI ATAYSGHQFG VWAGQLGDGR AILLGEIAGQ ELQLKGAGKT QYSRMGDGRA 
VLRSSIREFL CSEAMHALGI PTSRALSVVG SDMPVRRETI ETAAVCARLA PSFLRVGHFE 
HYAASQNQVR VKELADLLIQ EHYPDCLSSK DPYLELFKQI CIRNAELVAQ WQAVGFCHGV 
LNSDNISAIG ITLDYGPFGF LDEFQIDHIC NHSDQAGRYA YHRQPQIMHW NMACLASTFI 
PLLENQYSEE KAQDILRDAL EIFPKSYAST WQSLFRRKLG FAIDHENDIK LVERLLQAMH 
DSRVDFTTLF RKLSDIKKTD CVDAIALRDE FIDRVSIDQW LSDYLLRLQM ELDDDATRKI 
KMDGVNPKFI LRNHLAQEAI NKAQQHDYAE IKTLLNILSR PFDDQPQHEK YAIAPPKDLQ 
KVDVSCSS