| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0925 |
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| Symbol | |
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| ID | 5053164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 920359 |
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| End bp | 920919 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471085 |
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| Product | polyhydroxyalkonate synthesis repressor, PhaR |
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| Protein accession | YP_001155705 |
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| Protein GI | 145589108 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.647369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTACCC GCGCTAAACG AGTTGGTGAA GATCGACTCA TTAAGAAATA CCCCAATCGT
CGTCTTTACG ACACCCAGAC AAGTACGTAC GTCACATTGG CCGATATCAA GGGCTTAGTG
ATGGGCAGTG AGAACTTCAA GGTAGTTGAT GCTAAGACTG ACGAAGACCT TACCCGCAAT
ATCCTATTGC AAATAATTCT TGAAGAAGAG GCTGGTGGAG CACCTGTTTT TTCTACCCAG
ATGCTCTCTC AAATTATTCG TTTTTACGGT AATTCGATGC AAGGTTTGAT GGGAAATTAT
CTCGAAAAGA CAATGCAATC GTTTGTTGAT ATACACAACA AGCTAGGCGA TCAAACTAAA
GGGTTGGGCG CAGGCAGTAC ACCTGAAGCT TGGTCTCAAA TGATGAATCT CAAAAACCCA
CTCATGCAAG GTTTGATGGG AAACTACATG GAGCAAAGCA AGGATTTGTT TGTGAAGATG
CAAGAGCAAT TGCAGGGCTC ACAAAATCTG TTTGGGTCTT TCCCATTCAC ACCTCACCCT
AACAAAACCG AAAAAGAATA G
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| Protein sequence | MVTRAKRVGE DRLIKKYPNR RLYDTQTSTY VTLADIKGLV MGSENFKVVD AKTDEDLTRN
ILLQIILEEE AGGAPVFSTQ MLSQIIRFYG NSMQGLMGNY LEKTMQSFVD IHNKLGDQTK
GLGAGSTPEA WSQMMNLKNP LMQGLMGNYM EQSKDLFVKM QEQLQGSQNL FGSFPFTPHP
NKTEKE
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