| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0905 |
|---|
| Symbol | |
|---|
| ID | 5053633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 899427 |
|---|
| End bp | 900602 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640471065 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001155685 |
|---|
| Protein GI | 145589088 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3825] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.687363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCATTC AGTTCTTTCT GAATTTGAAA GAGGCCAAAG TGCCTGTTTC AGTACGAGAA
TTTTTAACTC TACTTGATGC GCTGAAGTCC AATGTCATTA CCCCCTCAAT AGATGATTTT
TACCAACTGG CTCGCATGAC TTTGGTAAAA GATGAGCAAC ACTTTGATCG TTTTGACCAA
GCATTTGGTA GCTACTTTAA GGGTGTTGAA AAAATCATCG CTCTAACCCC AGATATCCCC
ATGGATTGGC TTGAAAAGAA GTTGCAACGG GTACTCAGCG ACGAAGAAAA GGTGGCCCTA
AAAAAACTGG GCGGACCTGA GGCCTTAAAA AAGCGCTTAG AAGAGCTTTT AAAAGAGCAA
AAAGAATGGC ATGGTGGAGG CAGTAAGTGG GTTGGAGCCG GTGGCTCATC TCCATTTGGG
CATAGCGGCT ACCACCCCGA AGGAATAAGA ATTGGTGGCG AAAGTGCCGG CAACCGCACT
GCGATTAAAG TGTGGGAAGC ACGAGAGTTT AAAGATTACG ACAGCGACCT AGCCCTAGGT
ACGCGCAATA TTAAAGTCGC TTTAAGACGC TTACGGCGTT TTGCTCGCGA AGGTTCTGTA
CTCGAGTTGG ATTTAGATAA AACCATTCAT TCGACTGCTG CCAATGCAGG AATGCTAGAT
ATTCAGATGC GCCCAGAGCG CCATAATCAA GTCAAGGTTC TTTTGTTGAT GGATGTGGGT
GGATCGATGG ATGATCACAT CCAGCGTATT GCTGAATTAT TCTCAGCAGC TAAAGCAGAA
TTTAAACATC TTGAGTACTA CTATTTTCAT AACTGTGTTT ATGAAAATCT ATGGCAAAGT
AATCGCCGCC GCCGTGATCA AGTTACCGCT ACCCAAGACA TCATTAATAA ATATGGCCCT
GATTACAAGC TCATATTTAT CGGTGATGCA ACTATGTCTC CCTATGAGAT CTTGAGTCCA
AATGGCTCTG TGGAATATAA CAATCGAGAA GCCGGTGCCG TTTGGATTAA TAGGCTTCTA
GACCACTTTC CCCATTTTGC GTGGCTCAAC CCAGAACCTG AATCTATTTG GGAATATCGA
CAATCGATCG ACATCATGAA GAACTTACTA AAAGATCGTA TGTATCCTGT TACGCTAAAC
GGTCTTGAAA GTGCCATGCG CCAACTTTCC AAGTAA
|
|---|
| Protein sequence | MLIQFFLNLK EAKVPVSVRE FLTLLDALKS NVITPSIDDF YQLARMTLVK DEQHFDRFDQ
AFGSYFKGVE KIIALTPDIP MDWLEKKLQR VLSDEEKVAL KKLGGPEALK KRLEELLKEQ
KEWHGGGSKW VGAGGSSPFG HSGYHPEGIR IGGESAGNRT AIKVWEAREF KDYDSDLALG
TRNIKVALRR LRRFAREGSV LELDLDKTIH STAANAGMLD IQMRPERHNQ VKVLLLMDVG
GSMDDHIQRI AELFSAAKAE FKHLEYYYFH NCVYENLWQS NRRRRDQVTA TQDIINKYGP
DYKLIFIGDA TMSPYEILSP NGSVEYNNRE AGAVWINRLL DHFPHFAWLN PEPESIWEYR
QSIDIMKNLL KDRMYPVTLN GLESAMRQLS K
|
|---|
| |