Gene Pnuc_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0890 
Symbol 
ID5053407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp882980 
End bp883321 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content39% 
IMG OID640471049 
Producthypothetical protein 
Protein accessionYP_001155670 
Protein GI145589073 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000125467 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATT TCCCATCTAA TTACCTGCAT TTTTCAAAGG CAGTTCATAG AGTGAATAAA 
CGTTATAGGA TCAATGACTC TAAAGAGTTA TTGGTGCTCG AGGCCGTATT AGATGCCCAT 
ATTGATGGCG TTGAATTTGT CGTATTAGAC CTTATCTTGC TCAATGAAAT TGCATCGCAA 
GCAACCCTTC ATTCTGTCAT GAAGGGCTTA ATTCTGAAGA AGATGATTAA GACTGAAACC 
TGTACACGCG ATGGAAGACG TAAGTTTGTA TTGCCTACAA AACACGGCTT AGCTTGGCTT 
AAAGATTGTT CCGAACTATT GGCTACTTTT CATCATCAAT GA
 
Protein sequence
MSDFPSNYLH FSKAVHRVNK RYRINDSKEL LVLEAVLDAH IDGVEFVVLD LILLNEIASQ 
ATLHSVMKGL ILKKMIKTET CTRDGRRKFV LPTKHGLAWL KDCSELLATF HHQ