Gene Pnuc_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0860 
Symbol 
ID5053997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp853432 
End bp854403 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content45% 
IMG OID640471019 
Productacetyl-CoA carboxylase carboxyltransferase subunit alpha 
Protein accessionYP_001155642 
Protein GI145589045 
COG category[I] Lipid transport and metabolism 
COG ID[COG0825] Acetyl-CoA carboxylase alpha subunit 
TIGRFAM ID[TIGR00513] acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGA CTTTCCTGGA TTTTGAGCAA CAAATCGCTG AATTAGAGTC AAAGATTGAA 
GAATTGCGTT TTGTGCAAGA TGAGTCATCG GTAGATATTT CTGATGAGAT CAAAACGCTT 
TCTGAAAAGA GTTTGCAACT CACTAAAGAT ATCTATGCCA ATTTAACGCC ATGGCAGGTA 
TCTCAAGTAG CGCGTCATCC ACAACGTCCT TATACATTGG ACTATGTTGG CGGATTATTC 
ACGGACTTCC ATGAGCTGCA TGGAGATCGA ACATTTGCCG ATGACCAATC CATTATTGGT 
GGACTAGCAC GCTTCGATAG CCAACCTTGT ATGGTGATTG GCCACCAAAA GGGTCGTGAT 
ACTAAAGAGC GCGCACTGCG TAACTTTGGT ATGAGCCGAC CTGAGGGATA TCGCAAGGCA 
ATGCGCCTAA TGCGTCTAGC TGAAAAATTC TCTATCCCAG TATTTACTTT TGTAGATACA 
CCGGGCGCAT TCCCTGGTAT CGATGCAGAA GAGCGCAATC AATCGGAAGC GATTGGGCGC 
AACTTGTATG TTCAAGCGGA GCTCACAGTG CCTATCATTG CCACCATCAT TGGTGAGGGT 
GGTTCAGGCG GTGCTCTAGC TATTGCAATG GGTGATGTGG TCTTGATGTT ACAGAACTCT 
ACTTACTCAG TAATTTCACC AGAAGGTTGC GCATCTATCC TTTGGAAAAC TGCTGATAAA 
GCATCAGAAG CTGCTGAGCA GTTGGGCCTA ACCGCACAAC GCATTAAGGC TCTAGGTTTA 
ATTGACAAGA TTGTGGCCGA GCCTATTGGT GGCGCTCATC GTGATTACGA TGTGATGATG 
GCCAATATGC GTAAGGCACT TTCTGATTCA CTCAAAACTT TCGATGGCAT GAAAGAAGAT 
GCATTACTTG AGCGTCGCCA TGAGCGTCTA ATGAGTTATG GCAAGTTCAA GGAAATCACA 
GTCAAAGCTT AA
 
Protein sequence
MKTTFLDFEQ QIAELESKIE ELRFVQDESS VDISDEIKTL SEKSLQLTKD IYANLTPWQV 
SQVARHPQRP YTLDYVGGLF TDFHELHGDR TFADDQSIIG GLARFDSQPC MVIGHQKGRD 
TKERALRNFG MSRPEGYRKA MRLMRLAEKF SIPVFTFVDT PGAFPGIDAE ERNQSEAIGR 
NLYVQAELTV PIIATIIGEG GSGGALAIAM GDVVLMLQNS TYSVISPEGC ASILWKTADK 
ASEAAEQLGL TAQRIKALGL IDKIVAEPIG GAHRDYDVMM ANMRKALSDS LKTFDGMKED 
ALLERRHERL MSYGKFKEIT VKA