Gene Pnuc_0847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0847 
Symbol 
ID5052586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp842343 
End bp843266 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content46% 
IMG OID640471006 
Productdihydrodipicolinate synthase 
Protein accessionYP_001155629 
Protein GI145589032 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAAATA AAGCTCATTC CCAAGGTAGT AAGAAGACTA TTCAAGGCAG CATGCCGGCT 
ATTGTGACGC CGATGTTCGA GGACGGTAGT TTGGATTACC CAGGCTTACG AGCTTTGTTA
GATTGGCATG TCAGCGAAGG TAGTGATGGC ATTGTGATTG TTGGAACTAG TGGTGAGTCG
CCTACAGTTT CAGTAGAAGA ACATTGCGAA TTAATTCGAG TAACAGTTGA ACAAATTGCT
GGCCGCATTC CTGTTATTGC TGGTACCGGT GGTAACTCGA CCCAAGAAGC GATTGAGCTC
ACTCACTTTG CTAAAAAGGT TGGGGCTGAT GCAAGTTTGC AGGTGGTGCC TTACTACAAT
AAGCCAACAC AAGAGGGTAT GTATGCCCAC TTTAAAAAAA TAGCAGAGTC TGTTGACCTT
CCAGTCATTT TATATAACGT ACCAGGGCGC ACCGTAGCTG ACATGGCTGG TGATACCGTA
GTGCGACTAG CGGGTGTACC GGGCATCATT GGCATTAAAG ATGCGACCGG TAGCTTAGAG
CGCGGCACCT TATTGATTAA TGACCTCAAG CGTGCAGGTC ACCATGAGTT CTCTGTTTTC
TCCGGCGATG ATTTAACTGC GGCGATGTTG ATGCTAATGG GCGGTCATGG CAATATCTCT
GTGACTGCAA ACGTGGCCCC GCGTTTAATG CATGAATTGT GTGTTGCTGC AATGTCAGAT
GATGTGAAAA GAACACGTGA AATTCAGTAC CAACTAATCG CAGTACATAA AGCAATGTTC
ATAGAGGCCA ATCCAATTCC TGTGAAATGG GCGCTTCATG AAATGGGTAA GATTACCGCC
GGCATCCGTT TGCCGTTAAC CCCTTTAAGC AGCTCTTTAA GAGAGCCTCT GAAGGCAGCA
TTAAAACAGG CAAACTTACT ATGA
 
Protein sequence
MTNKAHSQGS KKTIQGSMPA IVTPMFEDGS LDYPGLRALL DWHVSEGSDG IVIVGTSGES 
PTVSVEEHCE LIRVTVEQIA GRIPVIAGTG GNSTQEAIEL THFAKKVGAD ASLQVVPYYN
KPTQEGMYAH FKKIAESVDL PVILYNVPGR TVADMAGDTV VRLAGVPGII GIKDATGSLE
RGTLLINDLK RAGHHEFSVF SGDDLTAAML MLMGGHGNIS VTANVAPRLM HELCVAAMSD
DVKRTREIQY QLIAVHKAMF IEANPIPVKW ALHEMGKITA GIRLPLTPLS SSLREPLKAA
LKQANLL