Gene Pnuc_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0808 
Symbol 
ID5052198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp802469 
End bp802906 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content40% 
IMG OID640470965 
Producthypothetical protein 
Protein accessionYP_001155590 
Protein GI145588993 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.893436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TCATCAACTT ATTTCTTGCC ACCATACTGA CTTTTGGTCT TGGTTCAATG 
GCATTTGCAC AGCACACAGG CGCAACAAAA GTGGTTTATC ACATTGATGA TGCTGAATCA 
CAAGGTCTAA AGGGGTTGCG TAATATTCGT AACCATTTGG ATACGGCCCC TGATACCACC 
ATCATTGTCG TCACCCATGC CAATGGCGTT GATTTATTGA TGGAAGGTGC TAAAGACAAG 
AAAAATAATA TCGAGTACGC ACCACTGATT GGGGCATTGA AGTCTCGTGG CGTCAAATTT 
GAAGTATGTG AAATTACTTT AAAAAATCGC AATCTTAAGA AAGATCAATT TATTCTCGAT 
GCTGATTTCA CTCCATCAGG TGTTGTTCGT GTTGCGGACT TGCAATACAA GGATGGCTTT 
GCTTATATCA AGCCATAA
 
Protein sequence
MKKLINLFLA TILTFGLGSM AFAQHTGATK VVYHIDDAES QGLKGLRNIR NHLDTAPDTT 
IIVVTHANGV DLLMEGAKDK KNNIEYAPLI GALKSRGVKF EVCEITLKNR NLKKDQFILD 
ADFTPSGVVR VADLQYKDGF AYIKP