Gene Pnuc_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0802 
Symbol 
ID5052467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp797169 
End bp798251 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content47% 
IMG OID640470959 
Productcytochrome c, class I 
Protein accessionYP_001155584 
Protein GI145588987 
COG category[C] Energy production and conversion 
COG ID[COG4654] Cytochrome c551/c552 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.641735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAGT TGGCTAAAGT TGCAAAATTC ACTCTGTTTG CAGTTACAAC ATTTTTTGCG 
GTTGGTTCAG TGGTTGCGCA GAATTCGAGC ACGCACTATC CAGGCATCGG CAGAGACGCT 
ACGCCGGCAG AAGTTGCGGC CTGGGATATT GATGTTCGAC CAGACTTTAA AGGACTTCCC 
AAGGGATCTG GTTCGGTAGA AAAAGGTCAG CAACTCTGGG AAGCAAAGTG CTCTGTTTGT 
CATGGTACGT TTGGTGAGTC TAACGAGATA TTTACGCCCA TCATTGGTGG AACAACCACG 
GATGATATTA AAACGGGCAG GGTAGCTTCC CTTTCGGATA GAAAGCAGCC CCAAAGGACA 
ACCATTATGA AAGTGGCGAC AGTTTCTTCA TTGTGGGATT ACATCTATCG TGCAATGCCT 
TGGAATGCTC CGCGCTCACT CACGCCGGAT GACACCTTTG CATTGGTGGC TTACTTATTA 
AATATGGCGG AAGTAGTGCC TGATGATTTC GTGCTTAGCA ACACTAATAT TGCTGAAGTA 
CAAAAACGAA TGCCAAACCG AAATGGTATG ACTTTGAAGC ATGGCTTGTG GAATTCCAAA 
GGCACACCAG ATGTTCACGC TACTGCTTGC ATGACCAACT GTGTGCAATT CGTTCAAATT 
GGTTCAGAGT TGCCCGATTA CGCACGAAAT GCTCACGGAA ACATTGCAGA GCAGAATCGC 
CAATATGGCC CATTCCGCGG ATCTGACTCT ACAAAACCAC CCCTGACTAA GTTACCAGGC 
GCTTCAGCCG AAGGTTTAGC TCATGCATCT GAAACACATG CTTCTAAAAA GGGGCCGGCT 
GAATTGTTTA AGAGCGAGAA CTGCACGGCT TGCCATGCAA TGAGCACTAA GCTGGTTGGT 
CCTTCCGTTG CCGACATTGC TGCTAAATAT CAAGGGCAAA GTGGGGCTTT GGATACGCTA 
ATGGCTAAGG TTAAGAATGG AGGTTCAGGA GTTTGGGGAC CAATTCCGAT GCCAGCTCAG 
TCTCAATTGT CTGATGAAGA TCGTAAGGCG CTCGTGACTT GGGTGCTTTC TGGAGGTAAA 
TAA
 
Protein sequence
MFKLAKVAKF TLFAVTTFFA VGSVVAQNSS THYPGIGRDA TPAEVAAWDI DVRPDFKGLP 
KGSGSVEKGQ QLWEAKCSVC HGTFGESNEI FTPIIGGTTT DDIKTGRVAS LSDRKQPQRT 
TIMKVATVSS LWDYIYRAMP WNAPRSLTPD DTFALVAYLL NMAEVVPDDF VLSNTNIAEV 
QKRMPNRNGM TLKHGLWNSK GTPDVHATAC MTNCVQFVQI GSELPDYARN AHGNIAEQNR 
QYGPFRGSDS TKPPLTKLPG ASAEGLAHAS ETHASKKGPA ELFKSENCTA CHAMSTKLVG 
PSVADIAAKY QGQSGALDTL MAKVKNGGSG VWGPIPMPAQ SQLSDEDRKA LVTWVLSGGK