| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0795 |
|---|
| Symbol | |
|---|
| ID | 5053797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 790569 |
|---|
| End bp | 791465 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640470952 |
|---|
| Product | UbiA prenyltransferase |
|---|
| Protein accession | YP_001155577 |
|---|
| Protein GI | 145588980 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACCAAC TTTTTAAATA CTTTTTGGCA ACTAGACCAA CATTCCTGGT TATTACGCTA
CTCGGATGTT GGATAGGATT TCTAAGCAGC AGCCTAAGTG TGGCATGGTC CTTAAATTCT
CTCGCTGTAT TAGCAGTCCT AATGATTCAT GCATCATCTA ATTTATTAAA TGACTATTTT
GATTATTTAA ATGGAACTGA CCTTATCAAT ATCAATAGAA TTAGCCCCTT TACGGGTGGC
AGCCGCTTTA TCCAGGATAA CGTTTTCAGC CCGGGAGAAA TTTTTCGCCT TAGCATTGTA
TTGCTCGCCT TATCTGCATT GATTGGGCTC TATCTTTGCT ACACCAGCAC ATGGAAATTA
CTTGCCATCG GAATTACCGG CGTCTTTTTT GGTTGGTCTT ACTCGGCACC ACCATTAAAG
CTAATGTCCC GTGGAATATT AGGTGAAATA GCGATAGCAA GCGCCTGGAG TCTAGTCGTT
ATTGGTTTTT CAGTGCTGCA AAATGGCCAA GTCAATCTTG CCCTAATACC GCTTGCGCTT
GCTTATGGGC TAATGGTTGC AAATATTTTG TTCTTAAATC AGATACCTGA TATTGAGGCA
GATAGAAACT CTAGCAAAGA AACAATTGCC GTGAAAACCT TACCGCACAA GTTATGGAAG
TGGTATTCAG TCATCTTCAT GTCTGCATAT ATATTGCAAG CGATTAGTAT TTTTTATAAA
CAGACATATA TATCAACGCT GATTACCTTA GTAATGGCGC CAATTTTCAT CTTTTGCGCA
ATTCAGCTGC GAGCATTCCC GCTGGATCGA ACCAAGCAAA GCTGGATCAT TCCTCTAAAT
ATAATAGGAG TCCACCTATA TGCCCTACTA ATTTGCATGG GACTCTTCTG GGGGTAA
|
|---|
| Protein sequence | MNQLFKYFLA TRPTFLVITL LGCWIGFLSS SLSVAWSLNS LAVLAVLMIH ASSNLLNDYF
DYLNGTDLIN INRISPFTGG SRFIQDNVFS PGEIFRLSIV LLALSALIGL YLCYTSTWKL
LAIGITGVFF GWSYSAPPLK LMSRGILGEI AIASAWSLVV IGFSVLQNGQ VNLALIPLAL
AYGLMVANIL FLNQIPDIEA DRNSSKETIA VKTLPHKLWK WYSVIFMSAY ILQAISIFYK
QTYISTLITL VMAPIFIFCA IQLRAFPLDR TKQSWIIPLN IIGVHLYALL ICMGLFWG
|
|---|
| |