Gene Pnuc_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0788 
Symbol 
ID5053389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp786985 
End bp787512 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content48% 
IMG OID640470945 
Productprotein of unknown function DUF395, YeeE/YedE 
Protein accessionYP_001155570 
Protein GI145588973 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0768937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAGA CAAAAATTTC AAACCTACCT CAGCCTTATT GGAACCCCTT GGTAGCGGGT 
ATTTTGCTTG GAATGGTATT GCTGACGACT TTTGTCATAA CCGGTCATGG GCTGGGGGCA 
ACTGGCTTTA CTACTCGTTT GACTGCTTGG TTGGGAATGA ACCTTGCTCC AGTAGCCACA 
AGTGCAAATG ATTATTTGGG TGGAATGGTA GAGGATGGCA AGCCATTAAA TGCCTGGATT 
ACATGGCAGG TGGCTGGTGT TGCTATAGGC GCCCTTATTT CCGCTTATTT TGCCCACAGG 
ATTCAGTTTC AGATGGATGG GCGCAAATTC TTGGGGGGAT CTAAGCGTCC CATTACCGCA 
CTGATGGGTG GCGTATTGGC TGGTTTTGGT GCTCGTATTG CTGCGGGATG CACTAGTGGG 
TTGGGATTAT CAGGGGCGGC AGTCTTAAGT CTTGCTGGAT TCACATTTTT GTGCACATTC 
TTTGCGGTTG GCTTATTGGC CAATCGCTTT ATTAAAGAGG AGAAATAA
 
Protein sequence
MSETKISNLP QPYWNPLVAG ILLGMVLLTT FVITGHGLGA TGFTTRLTAW LGMNLAPVAT 
SANDYLGGMV EDGKPLNAWI TWQVAGVAIG ALISAYFAHR IQFQMDGRKF LGGSKRPITA 
LMGGVLAGFG ARIAAGCTSG LGLSGAAVLS LAGFTFLCTF FAVGLLANRF IKEEK