Gene Pnuc_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0786 
Symbol 
ID5053245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp785215 
End bp786147 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content44% 
IMG OID640470943 
Productcytochrome c, class I 
Protein accessionYP_001155568 
Protein GI145588971 
COG category[C] Energy production and conversion 
COG ID[COG3258] Cytochrome c 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00021722 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT ACTCCAAACA TTGCATTGCC TTGATATCAC TATTTTTGTG CACCGCTATT 
TACGCCGCAG ATAAAAGCAA GCTGGATGAT CAAACACAGA TTCCTGCAGC ACCCAACAAA 
TTAAGTAGTG AAAAATACTT CCAACCGCCT AAGGATTCAG ATCTACAAAA CAATGCCTTT 
GGGGATTTGG TTCGTAAGGG AGAGGCGCTA TTTGTTAATA CAAAGGCGCT TGCCCCTCAA 
AATGTTGGCA ATGAGATGAA TTGTGTGAAT TGCCATTTAG ATCGAGGTAG AAAAGCAAAC 
TCATCCCCAA TGTGGGGTGC TTATCCAATG TACCCTGCGT ATCGCAAAAA AAATAATAAA 
GTAAACACCT ACGCAGAAAG GTTGCAAGGT TGTTTTTCAT ACAGCATGAA TGGCACTCCA 
CCGCCAGCTG ATGGCGAAAT TATTCTTGCT CTTACTACCT ATTCTTATTG GTTATCAACA 
GGAGCGCCAA CTGGGAAAGC GCTTCCAGGC AGAGGTTTTG ATGAACCTCA ACCACCCAAA 
GGAGGATTTG ATATTGCGCG CGGAAAAGTG GTTTACGAAA AGCAGTGCGC AATTTGCCAT 
GGTGAAAATG GGGAAGGCAA AAAAGTTGGC GTGAACTATG TCTTTCCGCC GCTGTGGGGC 
AAAGACTCTT ATAACTGGGG AGCCGGAATG CACCGTATTA ATACTGCAGC CGGATTCATT 
CAACACAATA TGCCTCTTGG CCGTGGTGAA ACATTATCCG ATGTTGAAGC CTGGGATGTT 
GCTGCTTATG TGAATATGCA CGAACGCCCC CAAGATCCGA GGCTGATTGA TGGGGATATT 
GAAAAAACGC GTAAGCGATT CCATGCCGAT GATGGTGTTA ACCTTTATGG GACCACCCTA 
AATGGTGTAC TCATTGGGCA AGGAACAAAA TAA
 
Protein sequence
MKNYSKHCIA LISLFLCTAI YAADKSKLDD QTQIPAAPNK LSSEKYFQPP KDSDLQNNAF 
GDLVRKGEAL FVNTKALAPQ NVGNEMNCVN CHLDRGRKAN SSPMWGAYPM YPAYRKKNNK 
VNTYAERLQG CFSYSMNGTP PPADGEIILA LTTYSYWLST GAPTGKALPG RGFDEPQPPK 
GGFDIARGKV VYEKQCAICH GENGEGKKVG VNYVFPPLWG KDSYNWGAGM HRINTAAGFI 
QHNMPLGRGE TLSDVEAWDV AAYVNMHERP QDPRLIDGDI EKTRKRFHAD DGVNLYGTTL 
NGVLIGQGTK