| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0770 |
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| Symbol | truA |
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| ID | 5052169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 770815 |
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| End bp | 771642 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470927 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001155552 |
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| Protein GI | 145588955 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATAG CACTTGGTCT CCAATACGAT GGTAGTCCTT ATGCTGGTTG GCAAACCCAA
CTTCATCAGC CTACCATTCA AGATGAGCTA GAAAAGGCGC TGACTGCTTT TATTGGCGAA
GAAGCGAAGG CATTTCCAGT GCATACGATT ACTGCCGGAA GAACCGATAC TGGGGTTCAT
GCCCTAGGGC AAGTAGTGCA TTTCGATACC AATGTAGGGC GTGAAGATTT TTCTTGGGTA
AGAGGTGTAA ATACCTTTTT GCCTAAATCC ATTGTGGTGA ATTGGGCAAA AGAGGTGCCA
GAAGAATTTA GCGCGCGCTT TTCTGCATAT GAACGAACTT ATATTTATGC GTTGCATGCT
GGACCATGCC GTTCACCGAT AGTCAATGCT CGCGCAGGCT ATCTCATGCT ACCCCCGGAT
CAATTCCTTG ATGTTGAGGC CATGAAAAAA TCGGCTGAGT GTTTAATCGG AGAGCATGAT
TTCAGCTCAT TTCGTTCTTC GGAGTGCCAG AGTAAAACGC CTGTAAAAAC CATTTACGCT
ATTGACATTA TTTCTCAGGA ACCATGGGTG TATTTCCGTA TTCGGGGTAA TGCCTTTTTG
CACCATATGA TCCGTAATAT TGTTGGTTGT TTTTTGCAAA TTGGTCAGGG CAGACAACAG
TCTGGGTGGA TGGCTGAGGT ATTGACTGCT AAGAATCGGC AAATCGCTGC ACCTACCTTT
ATGGCGGATG GTCTATATTT AGCCAAAATT AAATATCCAG AAGAATTTGC AATCCCGCAG
CCTTGGCTGG AAAACGCGTG GCTTCCAACC AATGTCATCG GGAAATAA
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| Protein sequence | MRIALGLQYD GSPYAGWQTQ LHQPTIQDEL EKALTAFIGE EAKAFPVHTI TAGRTDTGVH
ALGQVVHFDT NVGREDFSWV RGVNTFLPKS IVVNWAKEVP EEFSARFSAY ERTYIYALHA
GPCRSPIVNA RAGYLMLPPD QFLDVEAMKK SAECLIGEHD FSSFRSSECQ SKTPVKTIYA
IDIISQEPWV YFRIRGNAFL HHMIRNIVGC FLQIGQGRQQ SGWMAEVLTA KNRQIAAPTF
MADGLYLAKI KYPEEFAIPQ PWLENAWLPT NVIGK
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