Gene Pnuc_0767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0767 
Symbol 
ID5052635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp767135 
End bp768205 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content47% 
IMG OID640470924 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_001155549 
Protein GI145588952 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG CAGTTCTCCC GGGCGATGGT ATCGGCCCGG AAATCGTTGC TCAAGCCGTT 
CGAGTGCTCC ATGCGCTTGG TCCAAAGTTT GATTTAGAGG AAGCGCCAGT AGGCGGGGCT 
GCTTATGATG TTGCTGGCCA CCCTTTGCCA CCAGCCACTC TTGAACTTGC TAAAAAAGCA 
GATGCTATTT TGTTCGGCGC TGTCGGTGAC TGGAAATACG ACACACTCGC ACGCGAACTT 
CGCCCTGAAC AAGCAATCTT AGGATTACGT AAACACTTAG AGTTGTTTGC CAACTTCCGT 
CCGGCCATTT GCTATCCAGA GCTCACTGCT GCATCTAGTC TTAAGCCAGA AATTATTGGC 
GGCTTAGATA TTTTGATTGT GCGTGAACTG AATGGCGATA TCTATTTTGG TCAACCACGT 
GGAATTCGTA CATCAGAATT GCCTTTGTTT AAAGGCGCGC GTGAAGGTTA TGACACCATG 
CATTACAGCG AGCCAGAAGT AGAGCGCATT GGTCGCGTTG CATTTGAAGC TGCGCGCAAA 
CGCGGTAAGA AAGTTTGTAG CGTAGATAAA GCGAATGTAT TGGAAACTTC ACAGCTCTGG 
CGTGAAGTCA TGATTCGTAT TTCTAAAGAG TATCCTGACG TTGAGTTGTC TCACATGTAT 
GTCGATAACG CAGCCATGCA GTTAGTAAAG GCGCCTAAAG CATTCGATGT TGTGGTGACG 
GGAAATTTAT TTGGCGATAT CTTGTCAGAT GAGGCGGCAA TGTTGACTGG CTCCATTGGT 
ATGCTGCCAT CAGCTTCTTT GGATAAGAAC AATAAGGGCT TGTATGAGCC TAGCCATGGT 
TCTGCACCCG ATATCGCTGG CAAAGGAATT GCAAACCCAT TGGCAACTAT ATTGTCCGCT 
GCAATGATGT TGCGTTATTC CTTAGGAATG CCTGCAGAAG CAGATCGCAT TGAAAAAGCG 
GTTCAAAAAG TGCTGGCTCA AGGTTTACGT ACTGCTGATA TTTATACCGA AGGAACTCAG 
AAGGTAACGA CAGTGCAAAT GGGCGATGCT GTAGTTGCCG CTCTGGCTTA A
 
Protein sequence
MKIAVLPGDG IGPEIVAQAV RVLHALGPKF DLEEAPVGGA AYDVAGHPLP PATLELAKKA 
DAILFGAVGD WKYDTLAREL RPEQAILGLR KHLELFANFR PAICYPELTA ASSLKPEIIG 
GLDILIVREL NGDIYFGQPR GIRTSELPLF KGAREGYDTM HYSEPEVERI GRVAFEAARK 
RGKKVCSVDK ANVLETSQLW REVMIRISKE YPDVELSHMY VDNAAMQLVK APKAFDVVVT 
GNLFGDILSD EAAMLTGSIG MLPSASLDKN NKGLYEPSHG SAPDIAGKGI ANPLATILSA 
AMMLRYSLGM PAEADRIEKA VQKVLAQGLR TADIYTEGTQ KVTTVQMGDA VVAALA