| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0764 |
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| Symbol | |
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| ID | 5053959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 764802 |
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| End bp | 766211 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470921 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001155546 |
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| Protein GI | 145588949 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGTA CGCTTTATGA CAAATTGTGG GATGACCACG TTGTTTACTC TGAAGAGGAT
GGCACAGCCA CGATCTATAT CGACCGTCAG CTATTGCATG AGGTAACCAG TCCTCAGGCG
TTCGAAGGTC TGAATTTGGC TGGTCGTCCT GTTTGGCGCA TCTCTGCTAA TTTAGCAGTC
AGTGACCATA ACGTTCCTAC TACTGATCGT TCCGAAGGAA TTGCAGATCC AATCTCAAAG
CTTCAAGTAG ATACCTTGGA TCAAAACTGC GATGCTTTTG GTATCACTCA ATACAAGATG
AACGATACCC GTCAGGGAAT TGTTCACGTC ATTGGGCCAG AGCAGGGTGC AACCTTACCT
GGTATGACAG TGGTATGCGG TGACTCTCAT ACAAGTACGC ATGGCGCCTT TGGAGCCTTA
GCGTTTGGTA TTGGAACCTC CGAAGTGGAG CATGTATTAG CCACTCAAAC GTTGCTCATG
AAAAAGAGCA AGAATATGTT GGTGCGTGTT GATGGCCGTT TGCAGCCAGG CTCTACTGCT
AAAGATATTG TGCTTGCTGT GATTGGGAAG ATTGGCACAG CCGGCGGCAC TGGTTACACC
ATCGAGTTCG CCGGTGAAGC TATTCGAAAC CTTTCTATGG AAGGTCGTAT GACGCTTTGC
AATATGGCGA TTGAAGCTGG CGCCCGCGCT GGTTTAGTTG CTGTTGACGA AACTACTATC
GAATATATTC AAGGTCGCCC ATACTCACCT AAGGGGCCTG CGATGCTACA AGCTCTGCAA
TATTGGAGAA CTTTGCACAC TGATGCAGAT GCTAAGTTCG ATGCTGTTGT GGAATTGCGT
GCAGAAGAAA TTGCTCCTCA AGTCACTTGG GGTACTTCAC CAGAAATGGT TCTCGCTATT
AGTGAACGCA TTCCTGATCC AGAAAAAGAA CGAGATCCAA ATAAGCGCTC TGCAATGGAA
CGTGCTTTAG AGTATATGAA CCTTACTCCT AATACGCCAT TAAGCAGTAT TACGATTGAT
AAGGTTTTTA TCGGCTCTTG CACCAATAGT CGCATCGAAG ATATCCGCGC GGCTGCTAAG
GTTGTAGACC GCCTTGGTAA GAAGGTAGCG CCTAATGTGA AGTTAGCATT AGTAGTTCCT
GGCTCTGGCT TGGTTAAAGC CCAGGCGGAA CGTGAAGGTT TAGATCGTAT TTTTAAAGCT
GCCGGCTTTG AATGGCGTGA GCCAGGCTGC TCTATGTGTT TGGCAATGAA TGCTGATCGT
TTAGAGCCAG GTGAGCGGTG TGCTTCAACC TCTAACCGGA ACTTTGAAGG TCGTCAGGGT
AATGGCGGCA GAACCCATTT AGTTAGCCCA GCAATGGCTG CGGCAGCTGC AATCGAAGGT
CATTTTGTTG ACGTTCGTAA AATTTCATAG
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| Protein sequence | MSRTLYDKLW DDHVVYSEED GTATIYIDRQ LLHEVTSPQA FEGLNLAGRP VWRISANLAV
SDHNVPTTDR SEGIADPISK LQVDTLDQNC DAFGITQYKM NDTRQGIVHV IGPEQGATLP
GMTVVCGDSH TSTHGAFGAL AFGIGTSEVE HVLATQTLLM KKSKNMLVRV DGRLQPGSTA
KDIVLAVIGK IGTAGGTGYT IEFAGEAIRN LSMEGRMTLC NMAIEAGARA GLVAVDETTI
EYIQGRPYSP KGPAMLQALQ YWRTLHTDAD AKFDAVVELR AEEIAPQVTW GTSPEMVLAI
SERIPDPEKE RDPNKRSAME RALEYMNLTP NTPLSSITID KVFIGSCTNS RIEDIRAAAK
VVDRLGKKVA PNVKLALVVP GSGLVKAQAE REGLDRIFKA AGFEWREPGC SMCLAMNADR
LEPGERCAST SNRNFEGRQG NGGRTHLVSP AMAAAAAIEG HFVDVRKIS
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