| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0760 |
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| Symbol | |
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| ID | 5053703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 760622 |
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| End bp | 762400 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470917 |
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| Product | succinate dehydrogenase, flavoprotein subunit |
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| Protein accession | YP_001155542 |
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| Protein GI | 145588945 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCAA TTCAAAAATC ATTGCCACGC CGCCGTTTTG ACGCGGTGAT TGTTGGTGCG
GGTGGTTCAG GTATGCGCGC CTCGTTACAG TTAGCTGAAG CTGGCTTGAA TGTTGCTGTA
CTCACTAAAG TATTCCCAAC ACGTTCCCAT ACGGTAGCTG CCCAAGGTGG TATTGGCGCT
TCCCTCGGCA ACATGAGTGA AGACAATTGG CACTACCACT TTTACGACAC TATTAAAGGG
TCTGACTGGT TAGGCGATCA AGACGTGATC GAATTTATGT GTCGTGAAGC ACCAAAAGCC
GTTTATGAGC TCGAACACTT TGGTATGCCA TTTGACCGTA ACCCAGATGG CACGATTTAT
CAGCGCCCAT TTGGTGGTCA TACTGCAAAC TATGGTGAGA AGCCAGTGCA ACGTGCTTGT
GCTGCTGCTG ACCGAACCGG TCACGCCATG TTGCACACTT TGTATCAACG CAACGTACGT
GCAAAAACCA ATTTCTTTGT TGAGTGGTTA GCGCTCGACT TAATCCGTGA CGATGAAGGC
GATGTTGTTG GTGTAACTGC CCTCGAAATG GAAACAGGTC AGGTATACAT TCTCGAAGCC
AAAGTAGTGT TGATGGCAAC TGGTGGTGCT GGCCGTATTT GGGATGCATC TACCAATGCA
TTTATTAACA CTGGTGATGG TATGGGCCTC GCAGCTCGTG CAGGCATTCC ATTGGAAGAT
ATGGAGTTCT GGCAATTTCA CCCAACTGGC GTTGCTGGTG CTGGCGTGTT GCTGACAGAA
GGCTGTCGCG GTGAAGGCGG CATCTTGCGT AATAAAGATG GCGAACGTTT CATGGAGCGA
TATGCGCCAA CTTATAAAGA TTTAGCCCCG CGTGATTTCG TTTCACGTTG CATGGACCAA
GAGATTAAAG AAGGGCGCGG TTGCGGTCCT AATGGTGATT ACGTTGTGCT TGATTTAACG
CACATTGGCG CCGAAACTAT TATGAAGCGC TTGCCTTCTG TGTACGAGAT CGGTATCAAC
TTTGCTAACG TTGACGTTAC TAAAGAGCCA ATCCCAGTAG TGCCAACGAT TCACTATCAA
ATGGGCGGCA TTCCTACGAA TATTAATGGT CAAGTTGTTG TGCCTGCCAA TGGCATTCAT
AACGAAATTG TCAATGGTTT GTATGCGATT GGTGAGTGCT CATGCGTATC AGTGCACGGC
GCAAATCGTT TGGGTACCAA CTCATTGCTC GACCTTTTAG TATTTGGCCG TGCAGCAGGC
AATCACATTG TTGCCATGGA TCTTAAAAAT CGTGAGTTCA AAAAATTACC TGAGAATGCT
GGTCAGCACA CATTAGAGCG TATTGCTAAG TTGGATAACT CCACTTCTGG TGAATATGCA
CAAGATGTTG CAAATGACAT TCGTAAATGC ATGCAGAAAT ACGCTGGCGT ATTCCGCAAC
CAAGAGTTGA TGGACGAAGG TGTTCGTCAA ATGGCTAAAT TAACTGAGCG CGCTAAGCAC
TTATGGGTTA AAGATAAGTC AGAGATTTTC AATACAGCAC GTATTGAGGC CTTGGAAGTG
GCTAACTTGG TTGAGACTGC AAATGCAACT ATGATTTCTG CGGCAGCCCG CAAAGAAAGT
CGCGGCGCAC ACTCACATGA TGATCATCAA GAGCGCGATG ATGACAACTG GATGAAGCAT
ACCCTTTGGT ATAGCGAAGG AAATAAGCTG TCTTACAAGC CAGTTGTATT GAAGCCTTTG
ACCGTTGAGT CCTTCCCTCC TAAAGAACGT ACTTTCTAA
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| Protein sequence | MTAIQKSLPR RRFDAVIVGA GGSGMRASLQ LAEAGLNVAV LTKVFPTRSH TVAAQGGIGA
SLGNMSEDNW HYHFYDTIKG SDWLGDQDVI EFMCREAPKA VYELEHFGMP FDRNPDGTIY
QRPFGGHTAN YGEKPVQRAC AAADRTGHAM LHTLYQRNVR AKTNFFVEWL ALDLIRDDEG
DVVGVTALEM ETGQVYILEA KVVLMATGGA GRIWDASTNA FINTGDGMGL AARAGIPLED
MEFWQFHPTG VAGAGVLLTE GCRGEGGILR NKDGERFMER YAPTYKDLAP RDFVSRCMDQ
EIKEGRGCGP NGDYVVLDLT HIGAETIMKR LPSVYEIGIN FANVDVTKEP IPVVPTIHYQ
MGGIPTNING QVVVPANGIH NEIVNGLYAI GECSCVSVHG ANRLGTNSLL DLLVFGRAAG
NHIVAMDLKN REFKKLPENA GQHTLERIAK LDNSTSGEYA QDVANDIRKC MQKYAGVFRN
QELMDEGVRQ MAKLTERAKH LWVKDKSEIF NTARIEALEV ANLVETANAT MISAAARKES
RGAHSHDDHQ ERDDDNWMKH TLWYSEGNKL SYKPVVLKPL TVESFPPKER TF
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