Gene Pnuc_0719 details

Gene Information

• Locus tag: Pnuc_0719
• ID: 5053678
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
• Kingdom: Bacteria
• Replicon accession: NC_009379
• Strand: +
• Start bp: 717350
• End bp: 717994
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640470876
• Product: OmpW family protein
• Protein accession: YP_001155501
• Protein GI: 145588904
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3047] Outer membrane protein W

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCATTA AATCACTCGT AGCAGCAATG GCTGCAGTAG CATCCTTAGC CCCAATCGCT 
GCACAAGCAC AGACACAGGC TGTCGAAGAT GACAATCCAT GGATGGTGCG CGTACGTGCC 
GTTGATTTGT TATTTCAAAA TGGACAAACA AATACAGTTT CCACGCTGAA TGTAAAAGCT 
CAGAATCAAT GGATTCCAGA GTTCGATGTT TCGTATTTCT TCACTAAAAA TATAGCTGCC 
GAGTTAGTTT TAACATGGCC ACAGCAAGTT AACATTACTG CTGGATCTGG AAATACGAAT 
GTTGGAAAAA TTTCTGCCCT CCCGCCATCA CTCTTGGTTC AGTACCATTT CACTGATTTC 
GGCGCATTTA AACCATATGT TGGCGTTGGT GTGAATTACA CTATTTTCGG TAATCGTCAA 
AATTTCCCTG CTCTGGGTAA CAGTGTGCAG GTTGACCAGT CAAGTGTTGG TGTAGTTGGC 
CAAGTTGGTG CGGATTATAT GTTTGATAAA CACTGGGGTG CAAATATTGA TGTTAAATAT 
GCAACCATGA GTACTAATGT AAATACTGTT CAAGGTAATA CAAATTTAGG TAAGCTAACT 
TTAAATCCTT GGATGCCAGC AGTTGGTGTG ACTTATAAGT TCTAA 

 

Protein sequence

MRIKSLVAAM AAVASLAPIA AQAQTQAVED DNPWMVRVRA VDLLFQNGQT NTVSTLNVKA 
QNQWIPEFDV SYFFTKNIAA ELVLTWPQQV NITAGSGNTN VGKISALPPS LLVQYHFTDF 
GAFKPYVGVG VNYTIFGNRQ NFPALGNSVQ VDQSSVGVVG QVGADYMFDK HWGANIDVKY 
ATMSTNVNTV QGNTNLGKLT LNPWMPAVGV TYKF