Gene Pnuc_0703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0703 
Symbol 
ID5052168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp703034 
End bp704449 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content47% 
IMG OID640470860 
Productcarbohydrate-selective porin OprB 
Protein accessionYP_001155485 
Protein GI145588888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGCA AATTACTGCT CATTTTCCTG CTGAGCTTTT TGACTGCCTC TGTGTACGCG 
CAGAGGGCGG GGTCTGGTGC TGACCAGGTT GAGAGTTTTG CACGGCCCAT TGAAGGTCTT 
CCAACTGAAG GCACCATATT TGATTTGCCG GTAAACCTGC ACGGTCAGAC AACCTACATC 
AATCAGCGCT ATAACGCATT CAATTCTCCT TATCAGGGGC AAAACAGTTT GCTACCCGAT 
AAGTCGATGA GTTATACCTG GTCGGGGACG CTATTTTTTG GTGCACGTGT CGCCTCTGAT 
ACCGATATTT ATTTCAATCC TGAAGTAGTT TCTGGGGTGC CTTTTTCTGG ATTGACAGGT 
TTAGGTGGCC CTACCAATGG CGAGGCAACT CGCGCACAAG GTGCACAAGC CCATTTTTAT 
TCTGCTCGCG CATTCTTGCG TCAAACGATT AACCAAGAGG GTGGTAAGGT TGAGTTGGAA 
AATGATGCCA ACCAGATTAG TCAAACAGTC AGTAGCAATC GTTTTGTGAT TACTGCAGGA 
CAGTTTTCCA CCTTAGATAT TTTTGACGAT AGTAAATATG CCAAAGATCC CCGAGTGCAA 
TTTATGAACT GGGGCAATAT GACTTACCTA TCTTATGACT ACGCAGCCGA TGCGCGCGGC 
TATAGCTGGG GCTTGGCGGG TGAGTGGTAT CGCGATAATT GGGTCTTTAG GGCCTCACGC 
ATGCTAGCTC CAAAAGACCC AAACGGGCGC GATCTGAACT GGCAAATTTT TAATTCTTAC 
GGTGATCAGT TAGAGGTTGA ACGTCAACAC TCTATTGGTG ATTTGCCTGG CAAGGTCAGC 
GTACTGGGAT ATCGCAATCG AATGGTGATG GCGCGCTTCA CGGACGCCAC GAATTACTTG 
ATTGCCAATC AAGCGCAGGG TACACAAGCC ATTCTTAATG TACGCAACAG CGCTCAAGTC 
AAAACCGGTA TTGGTTTAAA TGCTGAACAA GCTTTGACAA AAGACATGGG AATTTATATG 
CGGGCATTTA CATCCGATGG GCATACTGAA ACAATGGCTT TTGCAGAAGC CGACAGCTCT 
TTATCTGTTG GCATGGGGAT TAATGGTGAG CGCTGGGGTA GGGCCAAAGA TACGATAGGC 
CTATCTGCGA TGCTCAATGG CATTTCATCT AATCGAAGAG CCTATTTACA AGCAGGGGGA 
ATTTCCAATT TCATTGGTGA CACCCCTTAT CCTTACGCAG GTCCAAGTCA GTCTATTAGT 
TATAAGCCTG AACAAATTAG TGAGGTGTAC TACAACGCTT TGGTGATTGA AAATGTCCTC 
TTGGGCCTCA ACTACCAGCA CATCATGAAC CCTGCCTACA ATGCAGCTCG CGGCCCTGTA 
AATGTTGTGT CTTTTAGAGT TCATGCCGAA TTTTGA
 
Protein sequence
MTRKLLLIFL LSFLTASVYA QRAGSGADQV ESFARPIEGL PTEGTIFDLP VNLHGQTTYI 
NQRYNAFNSP YQGQNSLLPD KSMSYTWSGT LFFGARVASD TDIYFNPEVV SGVPFSGLTG 
LGGPTNGEAT RAQGAQAHFY SARAFLRQTI NQEGGKVELE NDANQISQTV SSNRFVITAG 
QFSTLDIFDD SKYAKDPRVQ FMNWGNMTYL SYDYAADARG YSWGLAGEWY RDNWVFRASR 
MLAPKDPNGR DLNWQIFNSY GDQLEVERQH SIGDLPGKVS VLGYRNRMVM ARFTDATNYL 
IANQAQGTQA ILNVRNSAQV KTGIGLNAEQ ALTKDMGIYM RAFTSDGHTE TMAFAEADSS 
LSVGMGINGE RWGRAKDTIG LSAMLNGISS NRRAYLQAGG ISNFIGDTPY PYAGPSQSIS 
YKPEQISEVY YNALVIENVL LGLNYQHIMN PAYNAARGPV NVVSFRVHAE F