Gene Pnuc_0683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0683 
Symbol 
ID5052224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp681625 
End bp681963 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content45% 
IMG OID640470838 
Productnitrogen regulatory protein P-II 
Protein accessionYP_001155465 
Protein GI145588868 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.173796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA TTACATCAAT CATTAAGCCG TTCAAGCTCG ACGAAGTACG AGAAGCATTG 
GCAGAGGTTG GCGTTACTGG CCTGACCGTT ACCGAAGTAA AAGGTTTTGG CCGTCAAAAA
GGTCATACTG AACTTTATCG TGGTGCCGAG TATGTGGTGG ACTTTTTGCC CAAGGTAAAA
GTAGAAGCTG TTGTTCCTAG TGATCGCGTT GAAGCAGCGC TCGAGGCAAT TACTAAAGCA
GCACGTACTG GAAAAATTGG TGATGGCAAA ATTTTCGTTA CCCCGGTAGA ACAAGTCATT
CGCATTCGCA CTGGCGAAAC CAACGAAGCT GCTGTTTAA
 
Protein sequence
MKLITSIIKP FKLDEVREAL AEVGVTGLTV TEVKGFGRQK GHTELYRGAE YVVDFLPKVK 
VEAVVPSDRV EAALEAITKA ARTGKIGDGK IFVTPVEQVI RIRTGETNEA AV