Gene Pnuc_0667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0667 
Symbol 
ID5053236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp658657 
End bp659232 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content48% 
IMG OID640470821 
Producthypothetical protein 
Protein accessionYP_001155449 
Protein GI145588852 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTT CTGCCTTAAC CCTCTCCGCT GGAGTAGTTG CTTTAGCGGA GATGGGTGAT 
AAAACCCAAC TTCTGTCACT CATGTTGGCT GCGCGCTATC CAAAGCAGGC GTTGGCCATT 
ATCTGCGGCA TTTTTATTGC CACCATTGCT AATCATGCAT GTGCTGCGCT ACTTGGACAT 
TGGCTGACTA CCTTGGTATC GCCTGATGCA ATGCGTTGGA TATTAGGCGG AAGCTTTCTG 
GGTATTGGTC TATGGCTACT GGTACCAGAC CACATTGATG ATGCTGCCGA TTCAAAGGTA 
GCTGATCAGG CGCTCCAGGT ATTTTTTCTG ACGGTAGTGT TGTTTTTCTT GGCGGAGATG 
GGAGATAAAA CCCAAATCGC TACTATTGCC TTGGGTGCAA AATACTCGGA TGTATTCTCC 
GTAACTGTTG GCACCACATT GGGGATGATG TTAGCTAATG CCCCAGCAGT CTGGGTCGGT 
CAAAAATTTA CCAAGCGGAT GCCCATTAAA TGGGTGCATG CAGTGGCTGC TGTTACCTTT 
ATTGCGATTG GTATAGCTAC CCTAACGTGG AGCTGA
 
Protein sequence
MDFSALTLSA GVVALAEMGD KTQLLSLMLA ARYPKQALAI ICGIFIATIA NHACAALLGH 
WLTTLVSPDA MRWILGGSFL GIGLWLLVPD HIDDAADSKV ADQALQVFFL TVVLFFLAEM 
GDKTQIATIA LGAKYSDVFS VTVGTTLGMM LANAPAVWVG QKFTKRMPIK WVHAVAAVTF 
IAIGIATLTW S