| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0654 |
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| Symbol | |
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| ID | 5053763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 645482 |
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| End bp | 646033 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470808 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001155436 |
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| Protein GI | 145588839 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.197985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGTTTT GGTCCAAGCT CTCTAACGGC ATTGATCGCA TCAACCAGAT GCTGGGCAAC
GCAGCCAGCA TCATGATTTT ATTGTCCTGC GTAGTATCAG CGGCAAATGC CCTGATGCGT
TATGGGTTTG ATATCAGTAA TAACTGGCCG CTAGAACTCC AGTGGTACCT ATTTAGCGCA
GCTGTGATGT TGGGCGCCGC CTATACCCTC AAACGCAATG AGCATGTCCG CGTCGACCTC
ATTTATTCCC ACCTTTCTGA TCGCGGTCGC CTCCGGGTTG ATCTATTTGG CTTGATCGTC
TTTCTAATGC CTGCATGTTT ATTGTTTACA TGGCTTTCCT GGACAACCTT GTTTTATCCG
TCTTGGTTAA TTCAGGAACA CTCTTTAAAT TCTGGCGGAC TAGCTCGTTA TCCCATTAAA
TTTGTTGTGC CCTTTGGGTT TTTTATGTTG AGCCTGCAAG GTCTCTCAGA AATCATTAAG
CGAATTGGCG CACTCAAAGG CGAAATCGTG CTTCCTGCTG AAGACCTTCA TTACGAAAAG
CCAATGCAAT GA
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| Protein sequence | MEFWSKLSNG IDRINQMLGN AASIMILLSC VVSAANALMR YGFDISNNWP LELQWYLFSA
AVMLGAAYTL KRNEHVRVDL IYSHLSDRGR LRVDLFGLIV FLMPACLLFT WLSWTTLFYP
SWLIQEHSLN SGGLARYPIK FVVPFGFFML SLQGLSEIIK RIGALKGEIV LPAEDLHYEK
PMQ
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