| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0651 |
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| Symbol | |
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| ID | 5052519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 641293 |
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| End bp | 643560 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470805 |
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| Product | lysine decarboxylase |
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| Protein accession | YP_001155433 |
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| Protein GI | 145588836 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTC GTTTCCCAAT CATCATCATC GATGAGGATT TTCGCTCTGA GAATATATCG
GGTTCCGGTA TTCGTGATCT CGCCGAGGCC ATTGAAAACG AGGGTATGGA AGTGATCGGC
CTAACTAGTT ACGGCGACCT AACTTCATTT GCGCAGCAGG CCTCCCGTGC ATCTTCCTTT
ATCGTCTCAA TTGATGACGA AGAGTTTGTT TCTGATTCAG AAGACCATGA TCTGCCAGCA
TTAAATAATT TACGCGCATT TATTACTGAA GTGCGCAAAC GCAATGAAGA TATCCCTATC
TTCCTGTATG GCGAAACACG TACTTCCCGT CATATGCCTA ATGACATCTT GCGTGAATTG
CATGGCTTCA TTCATATGAA TGAGGACACG CCAGAATTCG TGGCGCGCCA TATTATTCGT
GAAGCGAAGG TGTATCTCGA TTCTTTAGCT CCCCCATTTT TTAGGGCGCT CACTAATTAC
GCTTCTGAAG GTTCCTATTC TTGGCATTGC CCTGGCCACT CTGGCGGCGT GGCTTTCTTG
AAGAGCCCAG TAGGACGTAT GTTCCATCAA TTCTTTGGTG AGAACATGTT GCGCGCAGAC
GTTTGTAATG CCGTTGAAGA ATTAGGTCAA TTGCTTGACC ATACTGGGCC AGTGTTGCAG
AGCGAACGCA ATGCTGCGCG CATCTTCAAT GCAGATCATT TGTTCTTTGT TACCAATGGT
ACATCTACTT CCAATAAAAT CGTTTGGCAC TCGACAGTTG CTCCCGGAGA TGTAGTATTA
GTAGACCGTA ATTGCCATAA GTCCGTAATT CATTCGATCA CGATGATGGG CGCGATTCCG
ATTTTCTTAA TGCCTACCCG TAATCACCTG GGCATCATTG GGCCGATTCC TAAAGAAGAG
TTTGAATGGA AAAACATCAA GAAAAAGATT GATGCTAATC CATTTATCAA AAATAAAGAT
GTCGTCCCTC GCGTGATGAC CTTGACCCAA AGCACCTACG ATGGAATTGT CTATAACGTT
GAGATGATTA AAGAAATGCT GGATGGCAAG GTAGATTCTT TACATTTTGA CGAAGCATGG
TTGCCGCACG CTGCTTTCCA TCCTTTTTAT AAGGATATGC ACGCGATTGG GTCTGATCGC
AAGCGCACCA AGAAGAGTTT GATGTTTGCT ACTCAATCGA CGCATAAGTT GTTGGCTGGT
CTCTCTCAAG CGTCCCAAGT ATTGGTTCAA GATGCGGAAG ATACCAAGCT AGACCGTGAT
TGCTTCAACG AGGCTTATCT CATGCACACC TCTACGAGTC CGCAGTACGC GATTATTGCG
TCATGCGACG TTTCGGCAGC CATGATGGAA TCACCTGGCG GAACCACTTT GGTGGAAGAG
TCTATTGCGG AGGCAATGGA CTTCCGTCGT GCCATGCGTG AGGTTGATGA CAAGTTTGGA
GCCGACTGGT GGTTTAAGGT TTGGGGACCA GATCATTTGG CCGAAGAAGG TATTGGCGAG
CGTTCTGATT GGATTTTGGA GCCATCAGCT TCTTGGCATG ATTTTGGCAA GCTTGCCAAA
GACTTCAATA TGCTTGACCC AATCAAAGCT ACGGTAGTGA CGCCTGGCTT AGACATTGAA
GGCAACTTTG GTTCAATGGG TATTCCGGCC AGCATTGTTA CTAAATATTT AGCTGAGCAC
GGTGTGATCG TAGAGAAGTG TGGTCTGTAC TCCTTCTTCA TCATGTTCAC TATCGGCATC
ACCAAGGGTC GTTGGAATAC CTTGGTGACT GAGTTGCAGC AATTTAAAGA TCATTTTGAT
AAAAATGCGC CTTTGTGGAA AGTGCTTCCA GAGTTCGTAG CTAAGCACCC TCGTTATGAG
CGCGTTGGTC TGAAAGATGT TTGCCAGCAA ATTCATGAGT TTTATAAGAG CCGTGATGTA
GCACGCATGA CCACTGAGAT GTACACCTCA GATATGGAGC CTGCAATGAT GCCTTCTGAG
GCTTGGGCAA AAATGGCTCA TAAGGAAGTG GATCGAGTGC CTTTGGATAG GCTGGATGGA
CGTGTAACGG CCATGTTGGT AACGCCATAC CCACCAGGCA TTCCATTGCT AATTCCAGGT
GAGCGCTTTA ATAAACGAAT TGTGGATTAC CTCTACTTTG CTAGAGACTT CAATGAGAAG
TTTCCTGGTT TTGAAACAGA TATCCATGGT TTGGTAAAAG CAGACGTTGA TGGACGTAGT
GAGTACTATG TGGACTGCGT TCGACAAGAA CGTGATATCA CTTTGTAA
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| Protein sequence | MKFRFPIIII DEDFRSENIS GSGIRDLAEA IENEGMEVIG LTSYGDLTSF AQQASRASSF
IVSIDDEEFV SDSEDHDLPA LNNLRAFITE VRKRNEDIPI FLYGETRTSR HMPNDILREL
HGFIHMNEDT PEFVARHIIR EAKVYLDSLA PPFFRALTNY ASEGSYSWHC PGHSGGVAFL
KSPVGRMFHQ FFGENMLRAD VCNAVEELGQ LLDHTGPVLQ SERNAARIFN ADHLFFVTNG
TSTSNKIVWH STVAPGDVVL VDRNCHKSVI HSITMMGAIP IFLMPTRNHL GIIGPIPKEE
FEWKNIKKKI DANPFIKNKD VVPRVMTLTQ STYDGIVYNV EMIKEMLDGK VDSLHFDEAW
LPHAAFHPFY KDMHAIGSDR KRTKKSLMFA TQSTHKLLAG LSQASQVLVQ DAEDTKLDRD
CFNEAYLMHT STSPQYAIIA SCDVSAAMME SPGGTTLVEE SIAEAMDFRR AMREVDDKFG
ADWWFKVWGP DHLAEEGIGE RSDWILEPSA SWHDFGKLAK DFNMLDPIKA TVVTPGLDIE
GNFGSMGIPA SIVTKYLAEH GVIVEKCGLY SFFIMFTIGI TKGRWNTLVT ELQQFKDHFD
KNAPLWKVLP EFVAKHPRYE RVGLKDVCQQ IHEFYKSRDV ARMTTEMYTS DMEPAMMPSE
AWAKMAHKEV DRVPLDRLDG RVTAMLVTPY PPGIPLLIPG ERFNKRIVDY LYFARDFNEK
FPGFETDIHG LVKADVDGRS EYYVDCVRQE RDITL
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