Gene Pnuc_0649 details

Gene Information

• Locus tag: Pnuc_0649
• Symbol: dcd
• ID: 5052214
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
• Kingdom: Bacteria
• Replicon accession: NC_009379
• Strand: +
• Start bp: 639802
• End bp: 640368
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640470803
• Product: deoxycytidine triphosphate deaminase
• Protein accession: YP_001155431
• Protein GI: 145588834
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0717] Deoxycytidine deaminase
• TIGRFAM ID: [TIGR02274] deoxycytidine triphosphate deaminase

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTATTA AATCTGACCA CTGGATCCGC CGCATGGGCG AGCAAGGCAT GATCAGCCCA 
TTTGAACCTG GGCAAGTTCG CCAAGACGCC GCAGGTAACA AAATCGTAAG CTATGGCACC 
TCAAGCTATG GCTATGACAT TCGCTGTGCA AATGAATTCA AGATCTTTAC GAATATCAAT 
AGCACCATTG TTGACCCCAA GAATTTCGAT GAGCAATCAT TTGTTGATTT CAAAGGCGAT 
GTTTGCATCA TTCCACCAAA TTCTTTTGCT TTGGCTAGAA CAGTCGAGTA CTTCAAGATC 
CCACGTAGCG TATTAACAGT CTGTGTTGGT AAAAGTACAT ATGCACGTTG TGGAATTATT 
GTGAACGTCA CTCCATTTGA GCCTGAGTGG GAAGGTTATG TGACGCTGGA GTTTTCTAAT 
ACCACGCCAC TACCTGCCAA AATTTATGCA GGCGAAGGTT GTGCGCAAGT ACTCTTCTTT 
GAAAGTGATG AAGTGTGCGG CACATCTTAT AAAGATCGCG GTGGTAAATA TCAAGGTCAG 
CGGGGCGTGA CCCTGCCCAA GACCTGA 

 

Protein sequence

MTIKSDHWIR RMGEQGMISP FEPGQVRQDA AGNKIVSYGT SSYGYDIRCA NEFKIFTNIN 
STIVDPKNFD EQSFVDFKGD VCIIPPNSFA LARTVEYFKI PRSVLTVCVG KSTYARCGII 
VNVTPFEPEW EGYVTLEFSN TTPLPAKIYA GEGCAQVLFF ESDEVCGTSY KDRGGKYQGQ 
RGVTLPKT