| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0607 |
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| Symbol | |
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| ID | 5051896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 596560 |
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| End bp | 597720 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470760 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001155389 |
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| Protein GI | 145588792 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCGCT TTTCATCCTT TAAGCCTAAA AAAGTCTTAT TCATTGCCAC ACGGCAAATT
GGCGATGTGT TGGTCACTAC TCCGCTCATT AGCAAGGCAC GTGAACTATG GCCTGATGCT
GAGTTTCATT TTTTGGGCTA CAAAGGCAAG CTGGATATGC TTAAGGGCAA TCCCGATATC
GCCCAATTGA TTGAAACCTC TGACCGCCCT AGCCTTGGTG AATACCTTTC TCTGTTTAAT
CGCCTATTCC AACGTTATGA CCTGGCCTTT GTCACACAAC CCAGCGATCG CGCTTACCTT
TATGGCTTAG TAGCAGCATT CAGACGCGTT GGGGTATTAG GCGGACATCC TCAAGGTAAA
GATACGCAGG ATCAGGCCAA AAGAGATAAA ACGCAAAAGC AAAATGCATG GAAAAAATGG
ATCTCCATAC ATACAGTCGG TGTAGATTAC TTTTCACAAC ATGTCATCAC TGAAAAATTA
CGCTTACTAG AAGTATTTTT TAAAAATCCG GAAGCGCTTT TCAGTAAACC CATTTCAGTA
ACACCGCCTG TAGGTGAGGC TTTGACCCCA GTCATTACCA ACGAGCTTAC CCAGCCTTAT
GTAGTTATTC ATCCGGGTCC ATTAACAGCA TACAAGCGCT GGCCTTTAGC TCACTGGCAA
CAATTAATAA CTTGGCTGGT GCAACGAGGC TTTCAGGTCG TTTTAAGTGC TTCGCCGGCC
AAGCAAGACC TTGCCTTAAA TCAAGACATC TTGTCACTAC TCGATGAGAG TGTGCAAAAA
CAGGTGCTTG ATAGCGCTGG AAGATTATCC CTTCCTCAGG CAGGTTCTTT GCTACGCGGC
GCGGCGCTTT ATGTAGGAGT GGATACCTCA ATTACGCATT TGGCTGCCGC CTGCAATATA
CCCACCATTG CTTTGTTTGG TGCCACTCCG CCCACTAATT TCGGGCCATG GCCGAATGGG
TTTATTGGTA AACAACCTTA TCAATTGCGT GCACGCTCAC AAACTGTAGG TAACGTCACT
ATCTTGCAAG GGCCAGGAGC ATGCGTTCCC TGTCGTCAGG CTGGATGTTT AGATCGCGCT
GATAGTCATA GCGAATGCTT GGATTTATTG GAGCCGAATC AGGTAATCCA GGCGATTGAA
CAAGCGCTCA ACCAACAATA A
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| Protein sequence | MTRFSSFKPK KVLFIATRQI GDVLVTTPLI SKARELWPDA EFHFLGYKGK LDMLKGNPDI
AQLIETSDRP SLGEYLSLFN RLFQRYDLAF VTQPSDRAYL YGLVAAFRRV GVLGGHPQGK
DTQDQAKRDK TQKQNAWKKW ISIHTVGVDY FSQHVITEKL RLLEVFFKNP EALFSKPISV
TPPVGEALTP VITNELTQPY VVIHPGPLTA YKRWPLAHWQ QLITWLVQRG FQVVLSASPA
KQDLALNQDI LSLLDESVQK QVLDSAGRLS LPQAGSLLRG AALYVGVDTS ITHLAAACNI
PTIALFGATP PTNFGPWPNG FIGKQPYQLR ARSQTVGNVT ILQGPGACVP CRQAGCLDRA
DSHSECLDLL EPNQVIQAIE QALNQQ
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