Gene Pnuc_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0538 
Symbol 
ID5051892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp528595 
End bp529392 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content42% 
IMG OID640470692 
Producthypothetical protein 
Protein accessionYP_001155322 
Protein GI145588725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.86943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTCC CATTACTTCG GTTCGCGCTT TCTTATCCAG GAATAGATCT CAGGATAACG 
CTAGTCCTTT TTGTTCTACT GCTTTGTTTT AGTGCTTACT GGTTTTTTCA AAAATTGTTT 
CCCCACCTTT TATTTGGTGA AGATGCGCCT TATGCTGGCT ATATCTATAA CGCAATGGGG 
GTGGTATTCA GTCTCGTATT TGCATTTGTT ACGGTACTGG TTTGGCAAAA TTACAATGGG 
GTGAGCGATG CAGTAGCTAA AGAGGCCAGC ACCCTAAATA ATGTCTATCG CGTCTTTTCT 
GCCTTCCCGC CAGAAATTGA CAAGACTGGA AAAGCCCAAG TAAGAGCCTA TGTCAAGACC 
GTAATAAATG AAGAGTGGCC ACTGCTGAGT AAGAATGAAT TTAGCCTTAA GGCTTATAAG 
GAGCTCACGA CATTAGAGGA TCTTGCAGTT CAGATTAAGC CGAAAAATAT GGGCGAATCT 
AACGCGCACC AACAGCTTCT ACACTTAACA CTACAGGCAA CTGAATTACG TCGAAGCCGA 
ATTTTCAATG CGAAATTTGC ACTAGCTCCG GCAGCTTGGG TTGGCCTTGG ATCAAGCTTA 
ATGGTATTTC TAATTTTTTC CTGTCTTTTC CAGATGAAGT CCCGGAAGAT ACATATGATT 
CTGATTGCAT TCCTAAGTCT AACGGTAGTA GGTATTTTGT ATTTCCTCAT TTTATTTATT 
CACCCTTTCT TGGGGCCTTT AGCCATCACG CCCGAACCCT TTACTGCCCT CCTTAATACT 
TCCTGGGTAT ATCAATAG
 
Protein sequence
MDFPLLRFAL SYPGIDLRIT LVLFVLLLCF SAYWFFQKLF PHLLFGEDAP YAGYIYNAMG 
VVFSLVFAFV TVLVWQNYNG VSDAVAKEAS TLNNVYRVFS AFPPEIDKTG KAQVRAYVKT 
VINEEWPLLS KNEFSLKAYK ELTTLEDLAV QIKPKNMGES NAHQQLLHLT LQATELRRSR 
IFNAKFALAP AAWVGLGSSL MVFLIFSCLF QMKSRKIHMI LIAFLSLTVV GILYFLILFI 
HPFLGPLAIT PEPFTALLNT SWVYQ