Gene Pnuc_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0535 
Symbol 
ID5051897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp524211 
End bp525938 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content46% 
IMG OID640470689 
ProductSSS family solute/sodium (Na+) symporter 
Protein accessionYP_001155319 
Protein GI145588722 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGCA TAGAAAAATT ATTGTGTGCA TTAGCACTTT TAGTATTGCC TGTATTGGCA 
ATCGCAGCTG GCGCCGATAT GGGCCAGATT GAAAAACAAG AAACCAACTG GGTTGCTATT
GGTATGTTTG CGGCATTCGT TGCCGGTACT CTTTTCATTA CTAAGTGGGC CGCTACTAAA
ACGAAGTCTG CTGCAGACTT CTATACTGGT GGTGGTGGCA TTACAGGTTT CCAAAACGGC
TTGGCTATTG CTGGTGACTA CATGTCTGCA GCTTCCTTTT TGGGTATTTC TGCAGCGGTT
ATGGCTAACG GCTATGACGG CTTGATTTAC TCTATCGGAT TCTTGGTGGG CTGGCCAGTA
ATTACCTTCT TGATGGCTGA GCGTTTACGT AACTTAGGTA AATTTACTTT TGCCGACGTT
GCTGGATATC GTTTCCAGCA AGGCCCAATT AGAGCCTTTG CCGCATCTGG TACTTTGGTT
GTTGTTGCGT TCTACCTGAT CGCTCAAATG GTTGGTGCCG GTCAATTGAT CAAATTGCTC
TTCGGCCTTG AGTACTGGAT GGCTGTTGTG ATCGTTGGTT GCTTGATGAT GATCTATGTG
TTGTTCGGCG GTATGACTGC AACTACATGG GTTCAAATCA TTAAAGCTTG CTTGCTATTA
GCGGGCGTAA CCTTCATGGC ATTTATGGTA TTGGCTGAGT ATGGCTTTAG CCCAGCAGCG
TTGTTTGCAA AAGCAGTTGA GGTGAAAACA GCGATTGCAG CTAATGCTGG TAAGACACCA
GAAGAAGCAG CTAAAGCTGG TTTAAGCATC ATGGGTCCAG GTGGATTTAT TAAGGATCCA
ATTTCAGCGA TCTCCTTCGG TATGGCATTG ATGTTTGGTA CGGCCGGTTT ACCGCATATC
TTGATGCGTT TCTTCACCGT ACCCGATGCA AAAGAAGCGC GTAAATCTGT TTTGTGGGCA
ACTACATGGA TCGGTTACTT CTACGTCTTA ATTTTCATTA TCGGTTTTGG TGCGATCACG
TTAGTGTTGA CCAATCCTGA GATGGCAAAC GTGGCTAAAG GGGTAATCAA CGGTGGTGCA
GGTACCGCAA ACATGGCTGC TGTTTTGGTT GCTAAGGTTG TTGGCGGAAA TATTTTCTTT
GGCTTTATCT CTGCAGTAGC ATTTGCGACG ATCTTGGCTG TGGTTGCCGG TTTAACCTTG
TCAGGTGCTT CAGCGGTATC CCATGATCTT TACGCTACGG TGATCAAGAA AGGAAATGCG
GATAGTGCAG CTGAGTTAAA AGTATCTCGT TTAACTACTT TGACTTTGGG TGTTATTGCG
GTGGTTTTAG GCATCGTTTT TGAAAAGCAA AATATTGCTT TCATGGTGTC CTTAGCCTTC
GCGATTGCCG CTTCTGCGAA CTTCCCAGTA TTGTTTATGT CGGTTCTTTG GAAGAATTGC
ACCACTAAGG GCGCCGTCAT CGGCGGCTTC TTGGGTCTCG TGTCTTCTGT AGCGTTGACC
GTAGTTTCTC CATCAGTATG GGAAGCGGTG TTGGGTAATC CGAAGGGTTC TGCATTATTC
CCTTATTCAT CACCAGCCTT GTTCTCTATC ACGATTGGCT TCCTAGGTGT TTGGTTGTTC
TCTATTTTAG ATAACAGTGA AAACGCTAAG AAAGAGCGCG CTGCATTTGC TGCCCAGCAA
GTTCGCTCTG AAACTGGTTT TGGTGCATCA GGAGCTTCTG GTCACTAA
 
Protein sequence
MNRIEKLLCA LALLVLPVLA IAAGADMGQI EKQETNWVAI GMFAAFVAGT LFITKWAATK 
TKSAADFYTG GGGITGFQNG LAIAGDYMSA ASFLGISAAV MANGYDGLIY SIGFLVGWPV
ITFLMAERLR NLGKFTFADV AGYRFQQGPI RAFAASGTLV VVAFYLIAQM VGAGQLIKLL
FGLEYWMAVV IVGCLMMIYV LFGGMTATTW VQIIKACLLL AGVTFMAFMV LAEYGFSPAA
LFAKAVEVKT AIAANAGKTP EEAAKAGLSI MGPGGFIKDP ISAISFGMAL MFGTAGLPHI
LMRFFTVPDA KEARKSVLWA TTWIGYFYVL IFIIGFGAIT LVLTNPEMAN VAKGVINGGA
GTANMAAVLV AKVVGGNIFF GFISAVAFAT ILAVVAGLTL SGASAVSHDL YATVIKKGNA
DSAAELKVSR LTTLTLGVIA VVLGIVFEKQ NIAFMVSLAF AIAASANFPV LFMSVLWKNC
TTKGAVIGGF LGLVSSVALT VVSPSVWEAV LGNPKGSALF PYSSPALFSI TIGFLGVWLF
SILDNSENAK KERAAFAAQQ VRSETGFGAS GASGH