Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0535 |
Symbol | |
ID | 5051897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 524211 |
End bp | 525938 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640470689 |
Product | SSS family solute/sodium (Na+) symporter |
Protein accession | YP_001155319 |
Protein GI | 145588722 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGCA TAGAAAAATT ATTGTGTGCA TTAGCACTTT TAGTATTGCC TGTATTGGCA ATCGCAGCTG GCGCCGATAT GGGCCAGATT GAAAAACAAG AAACCAACTG GGTTGCTATT GGTATGTTTG CGGCATTCGT TGCCGGTACT CTTTTCATTA CTAAGTGGGC CGCTACTAAA ACGAAGTCTG CTGCAGACTT CTATACTGGT GGTGGTGGCA TTACAGGTTT CCAAAACGGC TTGGCTATTG CTGGTGACTA CATGTCTGCA GCTTCCTTTT TGGGTATTTC TGCAGCGGTT ATGGCTAACG GCTATGACGG CTTGATTTAC TCTATCGGAT TCTTGGTGGG CTGGCCAGTA ATTACCTTCT TGATGGCTGA GCGTTTACGT AACTTAGGTA AATTTACTTT TGCCGACGTT GCTGGATATC GTTTCCAGCA AGGCCCAATT AGAGCCTTTG CCGCATCTGG TACTTTGGTT GTTGTTGCGT TCTACCTGAT CGCTCAAATG GTTGGTGCCG GTCAATTGAT CAAATTGCTC TTCGGCCTTG AGTACTGGAT GGCTGTTGTG ATCGTTGGTT GCTTGATGAT GATCTATGTG TTGTTCGGCG GTATGACTGC AACTACATGG GTTCAAATCA TTAAAGCTTG CTTGCTATTA GCGGGCGTAA CCTTCATGGC ATTTATGGTA TTGGCTGAGT ATGGCTTTAG CCCAGCAGCG TTGTTTGCAA AAGCAGTTGA GGTGAAAACA GCGATTGCAG CTAATGCTGG TAAGACACCA GAAGAAGCAG CTAAAGCTGG TTTAAGCATC ATGGGTCCAG GTGGATTTAT TAAGGATCCA ATTTCAGCGA TCTCCTTCGG TATGGCATTG ATGTTTGGTA CGGCCGGTTT ACCGCATATC TTGATGCGTT TCTTCACCGT ACCCGATGCA AAAGAAGCGC GTAAATCTGT TTTGTGGGCA ACTACATGGA TCGGTTACTT CTACGTCTTA ATTTTCATTA TCGGTTTTGG TGCGATCACG TTAGTGTTGA CCAATCCTGA GATGGCAAAC GTGGCTAAAG GGGTAATCAA CGGTGGTGCA GGTACCGCAA ACATGGCTGC TGTTTTGGTT GCTAAGGTTG TTGGCGGAAA TATTTTCTTT GGCTTTATCT CTGCAGTAGC ATTTGCGACG ATCTTGGCTG TGGTTGCCGG TTTAACCTTG TCAGGTGCTT CAGCGGTATC CCATGATCTT TACGCTACGG TGATCAAGAA AGGAAATGCG GATAGTGCAG CTGAGTTAAA AGTATCTCGT TTAACTACTT TGACTTTGGG TGTTATTGCG GTGGTTTTAG GCATCGTTTT TGAAAAGCAA AATATTGCTT TCATGGTGTC CTTAGCCTTC GCGATTGCCG CTTCTGCGAA CTTCCCAGTA TTGTTTATGT CGGTTCTTTG GAAGAATTGC ACCACTAAGG GCGCCGTCAT CGGCGGCTTC TTGGGTCTCG TGTCTTCTGT AGCGTTGACC GTAGTTTCTC CATCAGTATG GGAAGCGGTG TTGGGTAATC CGAAGGGTTC TGCATTATTC CCTTATTCAT CACCAGCCTT GTTCTCTATC ACGATTGGCT TCCTAGGTGT TTGGTTGTTC TCTATTTTAG ATAACAGTGA AAACGCTAAG AAAGAGCGCG CTGCATTTGC TGCCCAGCAA GTTCGCTCTG AAACTGGTTT TGGTGCATCA GGAGCTTCTG GTCACTAA
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Protein sequence | MNRIEKLLCA LALLVLPVLA IAAGADMGQI EKQETNWVAI GMFAAFVAGT LFITKWAATK TKSAADFYTG GGGITGFQNG LAIAGDYMSA ASFLGISAAV MANGYDGLIY SIGFLVGWPV ITFLMAERLR NLGKFTFADV AGYRFQQGPI RAFAASGTLV VVAFYLIAQM VGAGQLIKLL FGLEYWMAVV IVGCLMMIYV LFGGMTATTW VQIIKACLLL AGVTFMAFMV LAEYGFSPAA LFAKAVEVKT AIAANAGKTP EEAAKAGLSI MGPGGFIKDP ISAISFGMAL MFGTAGLPHI LMRFFTVPDA KEARKSVLWA TTWIGYFYVL IFIIGFGAIT LVLTNPEMAN VAKGVINGGA GTANMAAVLV AKVVGGNIFF GFISAVAFAT ILAVVAGLTL SGASAVSHDL YATVIKKGNA DSAAELKVSR LTTLTLGVIA VVLGIVFEKQ NIAFMVSLAF AIAASANFPV LFMSVLWKNC TTKGAVIGGF LGLVSSVALT VVSPSVWEAV LGNPKGSALF PYSSPALFSI TIGFLGVWLF SILDNSENAK KERAAFAAQQ VRSETGFGAS GASGH
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