Gene Pnuc_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0505 
Symbol 
ID5053592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp497642 
End bp498670 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content44% 
IMG OID640470659 
ProductADP-L-glycero-D-manno-heptose-6-epimerase 
Protein accessionYP_001155289 
Protein GI145588692 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTATTA TCGTAACTGG AGCAGCTGGT TTTATTGGTG CCAATATTGT CCAGGCGCTC 
AATGCGCGCG GCGAGAAAAA TATCATTGCA GTCGACGACT TACGTCCTGC CGATAAATAT 
CGAAATTTAG CTGATTTAGA CATTATTGAT TATCTTGATA AAGATGAATT TCTAGAGGCA 
TTTAGAAGCG GAAAGCTTGG TAAGATCAAA GCCGTTTTTC ATGAGGGTGC TTGTTCAGAC 
ACCATGGAAA CAGACGGTAT TTTCATGATG GCAAATAATT ATCGCTACAC CATGGATTTA 
CTTGATATCT GCACAGAGCA AAAAGTACAG TTGCTGTATG CCTCTTCAGC GGCCACCTAT 
GGCGGCTCTG ATGTCTTTAT CGAAAGCCGC GAGCATGAGA AGCCGCTCAA TATCTATGGC 
TACTCTAAGT TTCTGTTTGA CCAAGTAATG CGTAAGCGTT TTGCTGAGAA CGCAAATACA 
GCACAAGTAG TGGGCTTTCG GTATTTCAAT GTGTATGGCC CACGTGAGTC CCATAAAGGT 
CGCATGGCAT CTGTGGCTTT TCATCAATAC CATCAGTACA AGGCTAATGG CCATGTCAAA 
CTGTTTGGTG AGTATGGCGG CTATGGCCCT GGTGAACAAA GCCGTGACTT TGTATCCGTT 
GAAGACGTAG TCAAAGTCAA TTTATTCTTT TTAGACCACC CAGAAATTAG CGGCATCTTT 
AATTTGGGTA GCGGTCGTGC GCAGCCATTT AACGATGTTG CACATGCAGT AGCAAATGGG 
ATGCGTAAGC TTGACAAGGC AACCCCAGCA ACTTTGCAAG AATTGGTTAA AGAAAAAGCC 
ATTGAGTACA TTCCATTTCC AGATGCATTA AGAGGAAAAT ATCAGTGTTT TACCCAAGCA 
GACCTAACCA AGTTAAGGGC TGCAGGCTAT AAAGAGCCCT TCCTGAATGT AGAGCAAGGT 
GTAGGCCGAT ACATTGAGTG GCTAGAGGCG AATGCGGGGT TTTTAGCCAA TCCTTTAGAT 
AGCAAATAA
 
Protein sequence
MTIIVTGAAG FIGANIVQAL NARGEKNIIA VDDLRPADKY RNLADLDIID YLDKDEFLEA 
FRSGKLGKIK AVFHEGACSD TMETDGIFMM ANNYRYTMDL LDICTEQKVQ LLYASSAATY 
GGSDVFIESR EHEKPLNIYG YSKFLFDQVM RKRFAENANT AQVVGFRYFN VYGPRESHKG 
RMASVAFHQY HQYKANGHVK LFGEYGGYGP GEQSRDFVSV EDVVKVNLFF LDHPEISGIF 
NLGSGRAQPF NDVAHAVANG MRKLDKATPA TLQELVKEKA IEYIPFPDAL RGKYQCFTQA 
DLTKLRAAGY KEPFLNVEQG VGRYIEWLEA NAGFLANPLD SK